Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 REXO1L9P-201ENST00000604264 2108 ntBASIC15.68■□□□□ 0.1
HOXC12P31275 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXC12P31275 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXC12P31275 AC104581.1-202ENST00000635932 2618 ntBASIC15.68■□□□□ 0.1
HOXC12P31275 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
HOXC12P31275 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HOXC12P31275 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HOXC12P31275 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HOXC12P31275 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HOXC12P31275 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.68■□□□□ 0.1
HOXC12P31275 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HOXC12P31275 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXC12P31275 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXC12P31275 AC092183.1-201ENST00000469884 875 ntBASIC15.68■□□□□ 0.1
HOXC12P31275 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.68■□□□□ 0.1
HOXC12P31275 AF238378.1-201ENST00000526806 358 ntBASIC15.68■□□□□ 0.1
HOXC12P31275 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HOXC12P31275 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXC12P31275 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXC12P31275 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXC12P31275 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXC12P31275 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HOXC12P31275 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXC12P31275 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXC12P31275 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXC12P31275 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXC12P31275 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXC12P31275 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HOXC12P31275 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HOXC12P31275 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 NUS1P2-201ENST00000417358 873 ntBASIC15.67■□□□□ 0.1
HOXC12P31275 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.67■□□□□ 0.1
HOXC12P31275 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.67■□□□□ 0.1
HOXC12P31275 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.67■□□□□ 0.1
HOXC12P31275 DUTP2-201ENST00000519164 463 ntBASIC15.67■□□□□ 0.1
HOXC12P31275 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
HOXC12P31275 KRT18P58-201ENST00000527480 1120 ntBASIC15.67■□□□□ 0.1
HOXC12P31275 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.67■□□□□ 0.1
HOXC12P31275 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HOXC12P31275 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 AL773604.1-201ENST00000617417 272 ntBASIC15.67■□□□□ 0.1
HOXC12P31275 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXC12P31275 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
HOXC12P31275 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HOXC12P31275 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC12P31275 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HOXC12P31275 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXC12P31275 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HOXC12P31275 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 AC009113.1-201ENST00000570267 2443 ntBASIC15.66■□□□□ 0.1
HOXC12P31275 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXC12P31275 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
HOXC12P31275 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
HOXC12P31275 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC12P31275 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms