Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.93□□□□□ -0.02
COL8A2P25067 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
COL8A2P25067 HNRNPDP1-201ENST00000439535 754 ntBASIC14.93□□□□□ -0.02
COL8A2P25067 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.93□□□□□ -0.02
COL8A2P25067 AC073648.2-201ENST00000510116 352 ntBASIC14.93□□□□□ -0.02
COL8A2P25067 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.93□□□□□ -0.02
COL8A2P25067 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
COL8A2P25067 SART3-203ENST00000546611 1184 ntBASIC14.93□□□□□ -0.02
COL8A2P25067 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.93□□□□□ -0.02
COL8A2P25067 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.93□□□□□ -0.02
COL8A2P25067 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.93□□□□□ -0.02
COL8A2P25067 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.93□□□□□ -0.02
COL8A2P25067 AP000867.4-201ENST00000641616 219 ntBASIC14.93□□□□□ -0.02
COL8A2P25067 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.93□□□□□ -0.02
COL8A2P25067 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.93□□□□□ -0.02
COL8A2P25067 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.93□□□□□ -0.02
COL8A2P25067 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
COL8A2P25067 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL8A2P25067 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.92□□□□□ -0.02
COL8A2P25067 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
COL8A2P25067 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.92□□□□□ -0.02
COL8A2P25067 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
COL8A2P25067 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.92□□□□□ -0.02
COL8A2P25067 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
COL8A2P25067 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 AL356309.3-201ENST00000624132 1934 ntBASIC14.92□□□□□ -0.02
COL8A2P25067 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.92□□□□□ -0.02
COL8A2P25067 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.92□□□□□ -0.02
COL8A2P25067 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 COX5BP2-201ENST00000392354 334 ntBASIC14.92□□□□□ -0.02
COL8A2P25067 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.92□□□□□ -0.02
COL8A2P25067 AL590627.1-203ENST00000421194 1026 ntBASIC14.92□□□□□ -0.02
COL8A2P25067 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
COL8A2P25067 AC122714.2-201ENST00000502787 707 ntBASIC14.92□□□□□ -0.02
COL8A2P25067 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.92□□□□□ -0.02
COL8A2P25067 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
COL8A2P25067 AC021087.4-201ENST00000563761 564 ntBASIC14.92□□□□□ -0.02
COL8A2P25067 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.92□□□□□ -0.02
COL8A2P25067 NKAPP1-205ENST00000585790 367 ntBASIC14.92□□□□□ -0.02
COL8A2P25067 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.92□□□□□ -0.02
COL8A2P25067 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.92□□□□□ -0.02
COL8A2P25067 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
COL8A2P25067 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
COL8A2P25067 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.92□□□□□ -0.02
COL8A2P25067 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.92□□□□□ -0.02
COL8A2P25067 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL8A2P25067 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 SIRPAP1-201ENST00000448467 1770 ntBASIC14.91□□□□□ -0.02
COL8A2P25067 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 NOC2LP1-202ENST00000452600 2235 ntBASIC14.91□□□□□ -0.02
COL8A2P25067 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.91□□□□□ -0.02
COL8A2P25067 AC018712.1-201ENST00000455767 687 ntBASIC14.91□□□□□ -0.02
COL8A2P25067 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.91□□□□□ -0.02
COL8A2P25067 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
COL8A2P25067 AL049840.3-201ENST00000602669 611 ntBASIC14.91□□□□□ -0.02
COL8A2P25067 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.91□□□□□ -0.02
COL8A2P25067 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
COL8A2P25067 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
COL8A2P25067 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms