Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.19■□□□□ 0.5
ERCC2P18074 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 AC104819.1-201ENST00000504587 486 ntBASIC18.19■□□□□ 0.5
ERCC2P18074 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC2P18074 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 AC012615.1-201ENST00000565797 1299 ntBASIC18.19■□□□□ 0.5
ERCC2P18074 BNIP3P18-201ENST00000593976 575 ntBASIC18.19■□□□□ 0.5
ERCC2P18074 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC2P18074 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ERCC2P18074 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC2P18074 TP73-AS1-210ENST00000637775 1455 ntBASIC18.19■□□□□ 0.5
ERCC2P18074 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.19■□□□□ 0.5
ERCC2P18074 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC2P18074 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 SIRPAP1-201ENST00000448467 1770 ntBASIC18.18■□□□□ 0.5
ERCC2P18074 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 FAM220CP-201ENST00000395253 831 ntBASIC18.18■□□□□ 0.5
ERCC2P18074 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.18■□□□□ 0.5
ERCC2P18074 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC2P18074 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
ERCC2P18074 AC122714.2-201ENST00000502787 707 ntBASIC18.18■□□□□ 0.5
ERCC2P18074 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.18■□□□□ 0.5
ERCC2P18074 AC011467.2-201ENST00000598425 242 ntBASIC18.18■□□□□ 0.5
ERCC2P18074 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.18■□□□□ 0.5
ERCC2P18074 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC2P18074 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERCC2P18074 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.18■□□□□ 0.5
ERCC2P18074 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 PP12613-201ENST00000424958 2230 ntBASIC18.18■□□□□ 0.5
ERCC2P18074 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ERCC2P18074 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERCC2P18074 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC2P18074 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC2P18074 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC2P18074 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
ERCC2P18074 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC2P18074 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC2P18074 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC2P18074 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC2P18074 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
ERCC2P18074 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
ERCC2P18074 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ERCC2P18074 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.17■□□□□ 0.5
ERCC2P18074 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.17■□□□□ 0.5
ERCC2P18074 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.17■□□□□ 0.5
ERCC2P18074 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
ERCC2P18074 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.17■□□□□ 0.5
ERCC2P18074 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.17■□□□□ 0.5
ERCC2P18074 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.17■□□□□ 0.5
ERCC2P18074 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC2P18074 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERCC2P18074 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC2P18074 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC2P18074 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.16■□□□□ 0.5
ERCC2P18074 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.16■□□□□ 0.5
ERCC2P18074 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 AC019129.2-201ENST00000609837 1235 ntBASIC18.16■□□□□ 0.5
ERCC2P18074 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.16■□□□□ 0.5
ERCC2P18074 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERCC2P18074 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERCC2P18074 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms