Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
COL11A2P13942 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 AC015922.1-201ENST00000421102 1152 ntBASIC21.41■■□□□ 1.02
COL11A2P13942 CNN2P2-201ENST00000443536 909 ntBASIC21.41■■□□□ 1.02
COL11A2P13942 CNN2P3-201ENST00000450201 906 ntBASIC21.41■■□□□ 1.02
COL11A2P13942 AC069335.1-201ENST00000489972 472 ntBASIC21.41■■□□□ 1.02
COL11A2P13942 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.41■■□□□ 1.02
COL11A2P13942 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.41■■□□□ 1.02
COL11A2P13942 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.41■■□□□ 1.02
COL11A2P13942 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 AL136317.3-201ENST00000618497 906 ntBASIC21.41■■□□□ 1.02
COL11A2P13942 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A2P13942 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A2P13942 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
COL11A2P13942 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A2P13942 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A2P13942 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A2P13942 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.4■■□□□ 1.02
COL11A2P13942 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.4■■□□□ 1.02
COL11A2P13942 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.4■■□□□ 1.02
COL11A2P13942 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A2P13942 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
COL11A2P13942 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.4■■□□□ 1.02
COL11A2P13942 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A2P13942 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
COL11A2P13942 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A2P13942 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.39■■□□□ 1.02
COL11A2P13942 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
COL11A2P13942 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL11A2P13942 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
COL11A2P13942 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL11A2P13942 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.39■■□□□ 1.01
COL11A2P13942 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL11A2P13942 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL11A2P13942 MYCLP1-201ENST00000372451 1075 ntBASIC21.39■■□□□ 1.01
COL11A2P13942 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.39■■□□□ 1.01
COL11A2P13942 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.39■■□□□ 1.01
COL11A2P13942 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL11A2P13942 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.39■■□□□ 1.01
COL11A2P13942 AC007274.1-201ENST00000439805 662 ntBASIC21.39■■□□□ 1.01
COL11A2P13942 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.39■■□□□ 1.01
COL11A2P13942 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.39■■□□□ 1.01
COL11A2P13942 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
COL11A2P13942 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL11A2P13942 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL11A2P13942 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.39■■□□□ 1.01
COL11A2P13942 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A2P13942 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A2P13942 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A2P13942 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A2P13942 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.38■■□□□ 1.01
COL11A2P13942 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A2P13942 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A2P13942 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.38■■□□□ 1.01
COL11A2P13942 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A2P13942 AC079140.1-201ENST00000508039 487 ntBASIC21.38■■□□□ 1.01
COL11A2P13942 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A2P13942 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.38■■□□□ 1.01
COL11A2P13942 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
COL11A2P13942 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
COL11A2P13942 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
COL11A2P13942 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A2P13942 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.38■■□□□ 1.01
COL11A2P13942 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A2P13942 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A2P13942 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.38■■□□□ 1.01
COL11A2P13942 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
COL11A2P13942 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.38■■□□□ 1.01
COL11A2P13942 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
COL11A2P13942 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
COL11A2P13942 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.38■■□□□ 1.01
COL11A2P13942 AC005034.1-201ENST00000426657 489 ntBASIC21.38■■□□□ 1.01
COL11A2P13942 AC244107.1-201ENST00000442033 332 ntBASIC21.38■■□□□ 1.01
COL11A2P13942 KLF2P3-201ENST00000451977 1087 ntBASIC21.38■■□□□ 1.01
COL11A2P13942 AC190387.1-201ENST00000551683 408 ntBASIC21.38■■□□□ 1.01
COL11A2P13942 AC005225.4-201ENST00000557330 545 ntBASIC21.38■■□□□ 1.01
COL11A2P13942 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.38■■□□□ 1.01
COL11A2P13942 RN7SL204P-201ENST00000582831 262 ntBASIC21.38■■□□□ 1.01
COL11A2P13942 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.37■■□□□ 1.01
COL11A2P13942 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A2P13942 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
COL11A2P13942 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A2P13942 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.37■■□□□ 1.01
COL11A2P13942 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
COL11A2P13942 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
COL11A2P13942 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.37■■□□□ 1.01
COL11A2P13942 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
COL11A2P13942 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A2P13942 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A2P13942 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A2P13942 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A2P13942 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.37■■□□□ 1.01
COL11A2P13942 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A2P13942 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
COL11A2P13942 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.37■■□□□ 1.01
COL11A2P13942 RN7SL589P-201ENST00000481268 310 ntBASIC21.37■■□□□ 1.01
COL11A2P13942 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms