Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A2P08572 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A2P08572 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.62■□□□□ 0.41
COL4A2P08572 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.62■□□□□ 0.41
COL4A2P08572 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COL4A2P08572 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A2P08572 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.62■□□□□ 0.41
COL4A2P08572 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A2P08572 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A2P08572 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A2P08572 AC098818.2-201ENST00000564925 2320 ntBASIC17.62■□□□□ 0.41
COL4A2P08572 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A2P08572 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A2P08572 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A2P08572 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COL4A2P08572 WIZP1-201ENST00000531444 2299 ntBASIC17.62■□□□□ 0.41
COL4A2P08572 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.62■□□□□ 0.41
COL4A2P08572 AL135999.2-201ENST00000622438 1686 ntBASIC17.62■□□□□ 0.41
COL4A2P08572 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
COL4A2P08572 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL4A2P08572 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.61■□□□□ 0.41
COL4A2P08572 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL4A2P08572 GPS2P2-201ENST00000430745 888 ntBASIC17.61■□□□□ 0.41
COL4A2P08572 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.61■□□□□ 0.41
COL4A2P08572 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.61■□□□□ 0.41
COL4A2P08572 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.61■□□□□ 0.41
COL4A2P08572 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.61■□□□□ 0.41
COL4A2P08572 AL135744.1-201ENST00000565098 629 ntBASIC17.61■□□□□ 0.41
COL4A2P08572 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.61■□□□□ 0.41
COL4A2P08572 LINC00628-201ENST00000628516 1289 ntBASIC17.61■□□□□ 0.41
COL4A2P08572 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.61■□□□□ 0.41
COL4A2P08572 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL4A2P08572 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.61■□□□□ 0.41
COL4A2P08572 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL4A2P08572 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COL4A2P08572 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.61■□□□□ 0.41
COL4A2P08572 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
COL4A2P08572 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL4A2P08572 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COL4A2P08572 SPDYE11-202ENST00000450699 704 ntBASIC17.61■□□□□ 0.41
COL4A2P08572 TIMM8BP1-201ENST00000452384 211 ntBASIC17.61■□□□□ 0.41
COL4A2P08572 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
COL4A2P08572 SPDYE9P-201ENST00000570642 692 ntBASIC17.61■□□□□ 0.41
COL4A2P08572 SPDYE10P-202ENST00000612005 668 ntBASIC17.61■□□□□ 0.41
COL4A2P08572 SPDYE8P-202ENST00000612377 668 ntBASIC17.61■□□□□ 0.41
COL4A2P08572 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
COL4A2P08572 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.61■□□□□ 0.41
COL4A2P08572 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.61■□□□□ 0.41
COL4A2P08572 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL4A2P08572 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL4A2P08572 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL4A2P08572 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL4A2P08572 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.6■□□□□ 0.41
COL4A2P08572 PI4KAP1-204ENST00000612579 1703 ntBASIC17.6■□□□□ 0.41
COL4A2P08572 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL4A2P08572 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL4A2P08572 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.6■□□□□ 0.41
COL4A2P08572 AP000997.3-201ENST00000623333 2250 ntBASIC17.6■□□□□ 0.41
COL4A2P08572 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.6■□□□□ 0.41
COL4A2P08572 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.6■□□□□ 0.41
COL4A2P08572 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL4A2P08572 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL4A2P08572 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.6■□□□□ 0.41
COL4A2P08572 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
COL4A2P08572 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL4A2P08572 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL4A2P08572 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
COL4A2P08572 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL4A2P08572 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL4A2P08572 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
COL4A2P08572 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
COL4A2P08572 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.6■□□□□ 0.41
COL4A2P08572 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL4A2P08572 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.6■□□□□ 0.41
COL4A2P08572 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.6■□□□□ 0.41
COL4A2P08572 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
COL4A2P08572 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.6■□□□□ 0.41
COL4A2P08572 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
COL4A2P08572 AC093503.3-201ENST00000624917 2352 ntBASIC17.6■□□□□ 0.41
COL4A2P08572 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL4A2P08572 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL4A2P08572 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL4A2P08572 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.59■□□□□ 0.41
COL4A2P08572 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A2P08572 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.59■□□□□ 0.41
COL4A2P08572 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.59■□□□□ 0.41
COL4A2P08572 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A2P08572 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.59■□□□□ 0.41
COL4A2P08572 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.59■□□□□ 0.41
COL4A2P08572 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.59■□□□□ 0.41
COL4A2P08572 AC051619.7-201ENST00000568314 623 ntBASIC17.59■□□□□ 0.41
COL4A2P08572 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.59■□□□□ 0.41
COL4A2P08572 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A2P08572 AP001059.3-201ENST00000619053 235 ntBASIC17.59■□□□□ 0.41
COL4A2P08572 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.59■□□□□ 0.41
COL4A2P08572 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A2P08572 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A2P08572 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A2P08572 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A2P08572 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms