Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC099336.1-202ENST00000602961 463 ntBASIC17.92■□□□□ 0.46
HLA-DQB2P05538 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 AC002558.1-201ENST00000488906 803 ntBASIC17.91■□□□□ 0.46
HLA-DQB2P05538 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 AL138688.1-201ENST00000624851 1594 ntBASIC17.91■□□□□ 0.46
HLA-DQB2P05538 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB2P05538 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 AC139713.2-201ENST00000641328 2723 ntBASIC17.9■□□□□ 0.46
HLA-DQB2P05538 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 RCN1P2-201ENST00000398357 915 ntBASIC17.9■□□□□ 0.46
HLA-DQB2P05538 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 AC109462.3-201ENST00000573934 613 ntBASIC17.9■□□□□ 0.46
HLA-DQB2P05538 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB2P05538 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.89■□□□□ 0.46
HLA-DQB2P05538 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 LYSMD4-203ENST00000378904 2122 ntBASIC17.89■□□□□ 0.45
HLA-DQB2P05538 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 AL049757.1-201ENST00000616842 1596 ntBASIC17.89■□□□□ 0.45
HLA-DQB2P05538 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 AC138894.3-201ENST00000603787 634 ntBASIC17.89■□□□□ 0.45
HLA-DQB2P05538 AC114341.1-201ENST00000618070 349 ntBASIC17.89■□□□□ 0.45
HLA-DQB2P05538 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DQB2P05538 INTS4P1-201ENST00000438455 1935 ntBASIC17.89■□□□□ 0.45
HLA-DQB2P05538 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms