Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.96■□□□□ 0.63
TIMP1P01033 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TIMP1P01033 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.96■□□□□ 0.63
TIMP1P01033 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 MYCLP1-201ENST00000372451 1075 ntBASIC18.96■□□□□ 0.63
TIMP1P01033 MIR943-201ENST00000401286 94 ntBASIC18.96■□□□□ 0.63
TIMP1P01033 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.96■□□□□ 0.63
TIMP1P01033 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.96■□□□□ 0.63
TIMP1P01033 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TIMP1P01033 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TIMP1P01033 AC002558.1-201ENST00000488906 803 ntBASIC18.96■□□□□ 0.63
TIMP1P01033 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.96■□□□□ 0.63
TIMP1P01033 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.96■□□□□ 0.63
TIMP1P01033 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.96■□□□□ 0.63
TIMP1P01033 AC099522.2-201ENST00000607001 744 ntBASIC18.96■□□□□ 0.63
TIMP1P01033 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.96■□□□□ 0.63
TIMP1P01033 TUBB3P1-201ENST00000405796 1332 ntBASIC18.96■□□□□ 0.63
TIMP1P01033 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TIMP1P01033 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.96■□□□□ 0.63
TIMP1P01033 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.96■□□□□ 0.63
TIMP1P01033 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
TIMP1P01033 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.96■□□□□ 0.63
TIMP1P01033 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMP1P01033 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.95■□□□□ 0.62
TIMP1P01033 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMP1P01033 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.95■□□□□ 0.62
TIMP1P01033 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TIMP1P01033 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TIMP1P01033 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TIMP1P01033 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMP1P01033 TFAMP1-201ENST00000412727 736 ntBASIC18.95■□□□□ 0.62
TIMP1P01033 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.95■□□□□ 0.62
TIMP1P01033 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.95■□□□□ 0.62
TIMP1P01033 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.95■□□□□ 0.62
TIMP1P01033 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.95■□□□□ 0.62
TIMP1P01033 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.95■□□□□ 0.62
TIMP1P01033 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TIMP1P01033 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
TIMP1P01033 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TIMP1P01033 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.95■□□□□ 0.62
TIMP1P01033 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TIMP1P01033 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMP1P01033 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMP1P01033 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.95■□□□□ 0.62
TIMP1P01033 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMP1P01033 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.95■□□□□ 0.62
TIMP1P01033 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMP1P01033 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TIMP1P01033 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TIMP1P01033 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TIMP1P01033 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.94■□□□□ 0.62
TIMP1P01033 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TIMP1P01033 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.94■□□□□ 0.62
TIMP1P01033 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.94■□□□□ 0.62
TIMP1P01033 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TIMP1P01033 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
TIMP1P01033 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.94■□□□□ 0.62
TIMP1P01033 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TIMP1P01033 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.94■□□□□ 0.62
TIMP1P01033 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TIMP1P01033 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TIMP1P01033 MIR661-201ENST00000384842 89 ntBASIC18.94■□□□□ 0.62
TIMP1P01033 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.94■□□□□ 0.62
TIMP1P01033 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TIMP1P01033 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.94■□□□□ 0.62
TIMP1P01033 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.94■□□□□ 0.62
TIMP1P01033 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.94■□□□□ 0.62
TIMP1P01033 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.94■□□□□ 0.62
TIMP1P01033 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.94■□□□□ 0.62
TIMP1P01033 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.94■□□□□ 0.62
TIMP1P01033 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.94■□□□□ 0.62
TIMP1P01033 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.94■□□□□ 0.62
TIMP1P01033 AP001059.3-201ENST00000619053 235 ntBASIC18.94■□□□□ 0.62
TIMP1P01033 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TIMP1P01033 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.94■□□□□ 0.62
TIMP1P01033 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TIMP1P01033 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.94■□□□□ 0.62
TIMP1P01033 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.94■□□□□ 0.62
TIMP1P01033 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.93■□□□□ 0.62
TIMP1P01033 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 AC009949.1-201ENST00000623048 1830 ntBASIC18.93■□□□□ 0.62
TIMP1P01033 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.93■□□□□ 0.62
TIMP1P01033 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TIMP1P01033 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms