Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TOP3BO95985 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.13■□□□□ 0.49
TOP3BO95985 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.13■□□□□ 0.49
TOP3BO95985 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TOP3BO95985 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TOP3BO95985 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TOP3BO95985 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.13■□□□□ 0.49
TOP3BO95985 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TOP3BO95985 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
TOP3BO95985 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TOP3BO95985 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TOP3BO95985 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TOP3BO95985 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TOP3BO95985 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TOP3BO95985 AC141586.5-201ENST00000624546 2050 ntBASIC18.13■□□□□ 0.49
TOP3BO95985 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.13■□□□□ 0.49
TOP3BO95985 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.12■□□□□ 0.49
TOP3BO95985 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOP3BO95985 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.12■□□□□ 0.49
TOP3BO95985 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOP3BO95985 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.12■□□□□ 0.49
TOP3BO95985 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.12■□□□□ 0.49
TOP3BO95985 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.12■□□□□ 0.49
TOP3BO95985 BX842568.4-201ENST00000421222 227 ntBASIC18.12■□□□□ 0.49
TOP3BO95985 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.12■□□□□ 0.49
TOP3BO95985 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.12■□□□□ 0.49
TOP3BO95985 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.12■□□□□ 0.49
TOP3BO95985 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TOP3BO95985 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.12■□□□□ 0.49
TOP3BO95985 AL136038.4-201ENST00000603606 1261 ntBASIC18.12■□□□□ 0.49
TOP3BO95985 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOP3BO95985 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOP3BO95985 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TOP3BO95985 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOP3BO95985 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.12■□□□□ 0.49
TOP3BO95985 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOP3BO95985 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
TOP3BO95985 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TOP3BO95985 AC009102.3-201ENST00000623118 1491 ntBASIC18.12■□□□□ 0.49
TOP3BO95985 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOP3BO95985 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TOP3BO95985 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.12■□□□□ 0.49
TOP3BO95985 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.12■□□□□ 0.49
TOP3BO95985 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
TOP3BO95985 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.12■□□□□ 0.49
TOP3BO95985 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOP3BO95985 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TOP3BO95985 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.12■□□□□ 0.49
TOP3BO95985 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 AL391807.1-203ENST00000604392 2365 ntBASIC18.11■□□□□ 0.49
TOP3BO95985 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 AC005104.2-201ENST00000427818 678 ntBASIC18.11■□□□□ 0.49
TOP3BO95985 AC073648.2-201ENST00000510116 352 ntBASIC18.11■□□□□ 0.49
TOP3BO95985 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.11■□□□□ 0.49
TOP3BO95985 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.11■□□□□ 0.49
TOP3BO95985 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TOP3BO95985 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.11■□□□□ 0.49
TOP3BO95985 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP3BO95985 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TOP3BO95985 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP3BO95985 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.1■□□□□ 0.49
TOP3BO95985 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TOP3BO95985 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP3BO95985 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP3BO95985 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP3BO95985 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TOP3BO95985 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TOP3BO95985 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.1■□□□□ 0.49
TOP3BO95985 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP3BO95985 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TOP3BO95985 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TOP3BO95985 PMS2P7-201ENST00000506558 1336 ntBASIC18.1■□□□□ 0.49
TOP3BO95985 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.1■□□□□ 0.49
TOP3BO95985 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.1■□□□□ 0.49
TOP3BO95985 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.1■□□□□ 0.49
TOP3BO95985 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.1■□□□□ 0.49
TOP3BO95985 TERC-201ENST00000602385 541 ntBASIC18.1■□□□□ 0.49
TOP3BO95985 AL691403.2-201ENST00000618460 490 ntBASIC18.1■□□□□ 0.49
TOP3BO95985 AC055717.3-201ENST00000622967 595 ntBASIC18.1■□□□□ 0.49
TOP3BO95985 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TOP3BO95985 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TOP3BO95985 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms