Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX2-2O95096 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX2-2O95096 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NKX2-2O95096 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 TP73-AS1-210ENST00000637775 1455 ntBASIC16.3■□□□□ 0.2
NKX2-2O95096 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 AL645608.8-201ENST00000606034 2086 ntBASIC16.3■□□□□ 0.2
NKX2-2O95096 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX2-2O95096 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX2-2O95096 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 MYCLP1-201ENST00000372451 1075 ntBASIC16.3■□□□□ 0.2
NKX2-2O95096 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NKX2-2O95096 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NKX2-2O95096 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX2-2O95096 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NKX2-2O95096 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NKX2-2O95096 MINOS1P3-201ENST00000457048 203 ntBASIC16.3■□□□□ 0.2
NKX2-2O95096 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 IGHV3-52-201ENST00000519770 353 ntBASIC16.3■□□□□ 0.2
NKX2-2O95096 AC109462.3-201ENST00000573934 613 ntBASIC16.3■□□□□ 0.2
NKX2-2O95096 BNIP3P18-201ENST00000593976 575 ntBASIC16.3■□□□□ 0.2
NKX2-2O95096 AC092119.3-201ENST00000612618 583 ntBASIC16.3■□□□□ 0.2
NKX2-2O95096 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX2-2O95096 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX2-2O95096 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NKX2-2O95096 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX2-2O95096 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX2-2O95096 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX2-2O95096 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NKX2-2O95096 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NKX2-2O95096 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.29■□□□□ 0.2
NKX2-2O95096 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NKX2-2O95096 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX2-2O95096 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX2-2O95096 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NKX2-2O95096 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.29■□□□□ 0.2
NKX2-2O95096 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 AC104819.1-201ENST00000504587 486 ntBASIC16.29■□□□□ 0.2
NKX2-2O95096 AP000867.3-201ENST00000524675 377 ntBASIC16.29■□□□□ 0.2
NKX2-2O95096 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NKX2-2O95096 AC074051.2-201ENST00000565115 352 ntBASIC16.29■□□□□ 0.2
NKX2-2O95096 AC012615.1-201ENST00000565797 1299 ntBASIC16.29■□□□□ 0.2
NKX2-2O95096 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX2-2O95096 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-2O95096 AC092329.2-201ENST00000598402 547 ntBASIC16.29■□□□□ 0.2
NKX2-2O95096 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.29■□□□□ 0.2
NKX2-2O95096 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX2-2O95096 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-2O95096 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NKX2-2O95096 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX2-2O95096 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX2-2O95096 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-2O95096 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-2O95096 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NKX2-2O95096 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-2O95096 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 AL023806.1-201ENST00000603994 1649 ntBASIC16.28■□□□□ 0.2
NKX2-2O95096 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-2O95096 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms