Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS3O75489 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS3O75489 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS3O75489 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS3O75489 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS3O75489 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NDUFS3O75489 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS3O75489 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.64■□□□□ 0.41
NDUFS3O75489 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NDUFS3O75489 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NDUFS3O75489 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NDUFS3O75489 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NDUFS3O75489 REXO1L11P-201ENST00000620964 1927 ntBASIC17.63■□□□□ 0.41
NDUFS3O75489 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
NDUFS3O75489 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.63■□□□□ 0.41
NDUFS3O75489 RN7SL606P-201ENST00000472779 293 ntBASIC17.63■□□□□ 0.41
NDUFS3O75489 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.63■□□□□ 0.41
NDUFS3O75489 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.63■□□□□ 0.41
NDUFS3O75489 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.63■□□□□ 0.41
NDUFS3O75489 AC011840.4-201ENST00000578471 627 ntBASIC17.63■□□□□ 0.41
NDUFS3O75489 AL121672.3-201ENST00000608644 468 ntBASIC17.63■□□□□ 0.41
NDUFS3O75489 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NDUFS3O75489 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.63■□□□□ 0.41
NDUFS3O75489 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.63■□□□□ 0.41
NDUFS3O75489 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NDUFS3O75489 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS3O75489 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.63■□□□□ 0.41
NDUFS3O75489 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS3O75489 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NDUFS3O75489 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.62■□□□□ 0.41
NDUFS3O75489 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NDUFS3O75489 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS3O75489 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.62■□□□□ 0.41
NDUFS3O75489 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.62■□□□□ 0.41
NDUFS3O75489 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.62■□□□□ 0.41
NDUFS3O75489 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NDUFS3O75489 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.62■□□□□ 0.41
NDUFS3O75489 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.62■□□□□ 0.41
NDUFS3O75489 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS3O75489 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.62■□□□□ 0.41
NDUFS3O75489 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NDUFS3O75489 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS3O75489 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS3O75489 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NDUFS3O75489 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
NDUFS3O75489 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.61■□□□□ 0.41
NDUFS3O75489 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.61■□□□□ 0.41
NDUFS3O75489 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.61■□□□□ 0.41
NDUFS3O75489 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NDUFS3O75489 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.61■□□□□ 0.41
NDUFS3O75489 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NDUFS3O75489 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NDUFS3O75489 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.61■□□□□ 0.41
NDUFS3O75489 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.61■□□□□ 0.41
NDUFS3O75489 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.61■□□□□ 0.41
NDUFS3O75489 AC096633.1-201ENST00000422446 749 ntBASIC17.61■□□□□ 0.41
NDUFS3O75489 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.61■□□□□ 0.41
NDUFS3O75489 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
NDUFS3O75489 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFS3O75489 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms