Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUPT3HO75486 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.57■□□□□ 0.4
SUPT3HO75486 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUPT3HO75486 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUPT3HO75486 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.56■□□□□ 0.4
SUPT3HO75486 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.56■□□□□ 0.4
SUPT3HO75486 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SUPT3HO75486 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SUPT3HO75486 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SUPT3HO75486 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.56■□□□□ 0.4
SUPT3HO75486 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.56■□□□□ 0.4
SUPT3HO75486 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.56■□□□□ 0.4
SUPT3HO75486 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SUPT3HO75486 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.56■□□□□ 0.4
SUPT3HO75486 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.56■□□□□ 0.4
SUPT3HO75486 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.56■□□□□ 0.4
SUPT3HO75486 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.56■□□□□ 0.4
SUPT3HO75486 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.56■□□□□ 0.4
SUPT3HO75486 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.56■□□□□ 0.4
SUPT3HO75486 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SUPT3HO75486 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.56■□□□□ 0.4
SUPT3HO75486 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.56■□□□□ 0.4
SUPT3HO75486 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.56■□□□□ 0.4
SUPT3HO75486 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 AC116407.2-201ENST00000613639 860 ntBASIC17.56■□□□□ 0.4
SUPT3HO75486 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SUPT3HO75486 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.56■□□□□ 0.4
SUPT3HO75486 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.56■□□□□ 0.4
SUPT3HO75486 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SUPT3HO75486 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SUPT3HO75486 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT3HO75486 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SUPT3HO75486 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
SUPT3HO75486 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.55■□□□□ 0.4
SUPT3HO75486 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.55■□□□□ 0.4
SUPT3HO75486 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.55■□□□□ 0.4
SUPT3HO75486 AC018695.7-201ENST00000624587 2492 ntBASIC17.55■□□□□ 0.4
SUPT3HO75486 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.55■□□□□ 0.4
SUPT3HO75486 SPDYE15P-201ENST00000424157 909 ntBASIC17.55■□□□□ 0.4
SUPT3HO75486 AL137013.1-201ENST00000432946 1228 ntBASIC17.55■□□□□ 0.4
SUPT3HO75486 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.55■□□□□ 0.4
SUPT3HO75486 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SUPT3HO75486 AC005363.2-201ENST00000618631 242 ntBASIC17.55■□□□□ 0.4
SUPT3HO75486 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.55■□□□□ 0.4
SUPT3HO75486 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.55■□□□□ 0.4
SUPT3HO75486 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SUPT3HO75486 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.55■□□□□ 0.4
SUPT3HO75486 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT3HO75486 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SUPT3HO75486 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SUPT3HO75486 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.54■□□□□ 0.4
SUPT3HO75486 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SUPT3HO75486 AL645608.8-201ENST00000606034 2086 ntBASIC17.54■□□□□ 0.4
SUPT3HO75486 AC009949.1-201ENST00000623048 1830 ntBASIC17.54■□□□□ 0.4
SUPT3HO75486 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.54■□□□□ 0.4
SUPT3HO75486 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.54■□□□□ 0.4
SUPT3HO75486 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SUPT3HO75486 AC113347.1-201ENST00000413321 391 ntBASIC17.54■□□□□ 0.4
SUPT3HO75486 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms