Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTP4A3O75365 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTP4A3O75365 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTP4A3O75365 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTP4A3O75365 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.93■□□□□ 0.14
PTP4A3O75365 TSPY5P-201ENST00000426936 936 ntBASIC15.93■□□□□ 0.14
PTP4A3O75365 KRT18P38-201ENST00000449496 1282 ntBASIC15.93■□□□□ 0.14
PTP4A3O75365 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.93■□□□□ 0.14
PTP4A3O75365 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.93■□□□□ 0.14
PTP4A3O75365 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTP4A3O75365 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.93■□□□□ 0.14
PTP4A3O75365 AC005332.3-201ENST00000589904 676 ntBASIC15.93■□□□□ 0.14
PTP4A3O75365 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.93■□□□□ 0.14
PTP4A3O75365 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTP4A3O75365 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
PTP4A3O75365 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.93■□□□□ 0.14
PTP4A3O75365 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.93■□□□□ 0.14
PTP4A3O75365 NKILA-202ENST00000614771 2598 ntBASIC15.93■□□□□ 0.14
PTP4A3O75365 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTP4A3O75365 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTP4A3O75365 LINC01311-201ENST00000565162 1445 ntBASIC15.93■□□□□ 0.14
PTP4A3O75365 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PTP4A3O75365 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.93■□□□□ 0.14
PTP4A3O75365 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTP4A3O75365 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PTP4A3O75365 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PTP4A3O75365 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
PTP4A3O75365 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTP4A3O75365 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTP4A3O75365 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.93■□□□□ 0.14
PTP4A3O75365 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTP4A3O75365 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PTP4A3O75365 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PTP4A3O75365 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 RNF152P1-201ENST00000397754 604 ntBASIC15.92■□□□□ 0.14
PTP4A3O75365 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PTP4A3O75365 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.92■□□□□ 0.14
PTP4A3O75365 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.92■□□□□ 0.14
PTP4A3O75365 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.92■□□□□ 0.14
PTP4A3O75365 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.92■□□□□ 0.14
PTP4A3O75365 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PTP4A3O75365 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.92■□□□□ 0.14
PTP4A3O75365 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTP4A3O75365 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A3O75365 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.92■□□□□ 0.14
PTP4A3O75365 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.92■□□□□ 0.14
PTP4A3O75365 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
PTP4A3O75365 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.91■□□□□ 0.14
PTP4A3O75365 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PTP4A3O75365 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PTP4A3O75365 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PTP4A3O75365 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A3O75365 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A3O75365 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A3O75365 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.91■□□□□ 0.14
PTP4A3O75365 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 AC005521.1-201ENST00000393351 872 ntBASIC15.91■□□□□ 0.14
PTP4A3O75365 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A3O75365 HOMER2P1-201ENST00000455653 964 ntBASIC15.91■□□□□ 0.14
PTP4A3O75365 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.91■□□□□ 0.14
PTP4A3O75365 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.91■□□□□ 0.14
PTP4A3O75365 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.91■□□□□ 0.14
PTP4A3O75365 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A3O75365 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A3O75365 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.91■□□□□ 0.14
PTP4A3O75365 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.91■□□□□ 0.14
PTP4A3O75365 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.91■□□□□ 0.14
PTP4A3O75365 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms