Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE3O75131 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE3O75131 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE3O75131 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CPNE3O75131 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE3O75131 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE3O75131 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE3O75131 NOC2LP2-201ENST00000407594 1944 ntBASIC16.98■□□□□ 0.31
CPNE3O75131 AC068880.1-201ENST00000507289 2297 ntBASIC16.98■□□□□ 0.31
CPNE3O75131 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.98■□□□□ 0.31
CPNE3O75131 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE3O75131 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE3O75131 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE3O75131 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE3O75131 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE3O75131 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE3O75131 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CPNE3O75131 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.97■□□□□ 0.31
CPNE3O75131 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.97■□□□□ 0.31
CPNE3O75131 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.97■□□□□ 0.31
CPNE3O75131 AP000347.1-202ENST00000435868 847 ntBASIC16.97■□□□□ 0.31
CPNE3O75131 SCARNA2-201ENST00000458748 420 ntBASIC16.97■□□□□ 0.31
CPNE3O75131 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.97■□□□□ 0.31
CPNE3O75131 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CPNE3O75131 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CPNE3O75131 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE3O75131 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.96■□□□□ 0.31
CPNE3O75131 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CPNE3O75131 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE3O75131 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE3O75131 AC073648.2-201ENST00000510116 352 ntBASIC16.96■□□□□ 0.31
CPNE3O75131 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE3O75131 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE3O75131 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE3O75131 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.96■□□□□ 0.31
CPNE3O75131 MTDHP3-201ENST00000594186 672 ntBASIC16.96■□□□□ 0.31
CPNE3O75131 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 AC120114.3-201ENST00000611923 658 ntBASIC16.96■□□□□ 0.31
CPNE3O75131 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CPNE3O75131 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE3O75131 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE3O75131 TNRC18P3-201ENST00000441896 2691 ntBASIC16.96■□□□□ 0.31
CPNE3O75131 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE3O75131 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE3O75131 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE3O75131 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE3O75131 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE3O75131 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE3O75131 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE3O75131 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE3O75131 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CPNE3O75131 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CPNE3O75131 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE3O75131 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 AC132938.6-201ENST00000623828 1655 ntBASIC16.95■□□□□ 0.3
CPNE3O75131 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE3O75131 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE3O75131 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE3O75131 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.95■□□□□ 0.3
CPNE3O75131 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms