Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CTNND1O60716 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
CTNND1O60716 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CTNND1O60716 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTNND1O60716 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNND1O60716 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNND1O60716 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.57■□□□□ 0.88
CTNND1O60716 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNND1O60716 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNND1O60716 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNND1O60716 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.56■□□□□ 0.88
CTNND1O60716 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CTNND1O60716 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CTNND1O60716 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.56■□□□□ 0.88
CTNND1O60716 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.56■□□□□ 0.88
CTNND1O60716 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.56■□□□□ 0.88
CTNND1O60716 MIR4469-201ENST00000583919 79 ntBASIC20.56■□□□□ 0.88
CTNND1O60716 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.56■□□□□ 0.88
CTNND1O60716 AC010654.1-201ENST00000615722 808 ntBASIC20.56■□□□□ 0.88
CTNND1O60716 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CTNND1O60716 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CTNND1O60716 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.56■□□□□ 0.88
CTNND1O60716 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.56■□□□□ 0.88
CTNND1O60716 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.56■□□□□ 0.88
CTNND1O60716 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CTNND1O60716 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CTNND1O60716 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNND1O60716 AC009336.1-201ENST00000608941 1553 ntBASIC20.55■□□□□ 0.88
CTNND1O60716 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTNND1O60716 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CTNND1O60716 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNND1O60716 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.55■□□□□ 0.88
CTNND1O60716 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CTNND1O60716 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNND1O60716 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNND1O60716 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.55■□□□□ 0.88
CTNND1O60716 ALG1L5P-201ENST00000482043 771 ntBASIC20.55■□□□□ 0.88
CTNND1O60716 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.55■□□□□ 0.88
CTNND1O60716 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.55■□□□□ 0.88
CTNND1O60716 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.55■□□□□ 0.88
CTNND1O60716 AL596442.2-201ENST00000610240 980 ntBASIC20.55■□□□□ 0.88
CTNND1O60716 AL513190.1-201ENST00000621254 727 ntBASIC20.55■□□□□ 0.88
CTNND1O60716 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTNND1O60716 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTNND1O60716 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CTNND1O60716 AC097637.2-201ENST00000624096 1997 ntBASIC20.55■□□□□ 0.88
CTNND1O60716 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNND1O60716 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNND1O60716 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTNND1O60716 AC120498.9-201ENST00000339021 3867 ntBASIC20.55■□□□□ 0.88
CTNND1O60716 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CTNND1O60716 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CTNND1O60716 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.55■□□□□ 0.88
CTNND1O60716 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.55■□□□□ 0.88
CTNND1O60716 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 AC135776.1-201ENST00000319817 2481 ntBASIC20.54■□□□□ 0.88
CTNND1O60716 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.54■□□□□ 0.88
CTNND1O60716 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.54■□□□□ 0.88
CTNND1O60716 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CTNND1O60716 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CTNND1O60716 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 MRPL20P1-201ENST00000400819 433 ntBASIC20.54■□□□□ 0.88
CTNND1O60716 IGLL3P-201ENST00000412472 434 ntBASIC20.54■□□□□ 0.88
CTNND1O60716 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.54■□□□□ 0.88
CTNND1O60716 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.54■□□□□ 0.88
CTNND1O60716 AC254562.1-201ENST00000417586 456 ntBASIC20.54■□□□□ 0.88
CTNND1O60716 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
CTNND1O60716 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
CTNND1O60716 MKNK2P1-201ENST00000437526 628 ntBASIC20.54■□□□□ 0.88
CTNND1O60716 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.54■□□□□ 0.88
CTNND1O60716 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.54■□□□□ 0.88
CTNND1O60716 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.54■□□□□ 0.88
CTNND1O60716 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNND1O60716 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms