Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
KLHL41O60662 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHL41O60662 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHL41O60662 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHL41O60662 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
KLHL41O60662 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
KLHL41O60662 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
KLHL41O60662 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.58■□□□□ 0.4
KLHL41O60662 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KLHL41O60662 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHL41O60662 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHL41O60662 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHL41O60662 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHL41O60662 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
KLHL41O60662 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.58■□□□□ 0.4
KLHL41O60662 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KLHL41O60662 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHL41O60662 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 CROCCP2-202ENST00000412962 2773 ntBASIC17.57■□□□□ 0.4
KLHL41O60662 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.57■□□□□ 0.4
KLHL41O60662 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
KLHL41O60662 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KLHL41O60662 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KLHL41O60662 KRT18P56-201ENST00000507275 550 ntBASIC17.57■□□□□ 0.4
KLHL41O60662 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.57■□□□□ 0.4
KLHL41O60662 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHL41O60662 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHL41O60662 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHL41O60662 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.57■□□□□ 0.4
KLHL41O60662 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
KLHL41O60662 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
KLHL41O60662 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.56■□□□□ 0.4
KLHL41O60662 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
KLHL41O60662 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.56■□□□□ 0.4
KLHL41O60662 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.56■□□□□ 0.4
KLHL41O60662 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.56■□□□□ 0.4
KLHL41O60662 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KLHL41O60662 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.56■□□□□ 0.4
KLHL41O60662 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 AC069148.1-201ENST00000608741 768 ntBASIC17.56■□□□□ 0.4
KLHL41O60662 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
KLHL41O60662 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
KLHL41O60662 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
KLHL41O60662 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KLHL41O60662 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHL41O60662 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.56■□□□□ 0.4
KLHL41O60662 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.56■□□□□ 0.4
KLHL41O60662 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.56■□□□□ 0.4
KLHL41O60662 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KLHL41O60662 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KLHL41O60662 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.55■□□□□ 0.4
KLHL41O60662 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
KLHL41O60662 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.55■□□□□ 0.4
KLHL41O60662 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.55■□□□□ 0.4
KLHL41O60662 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
KLHL41O60662 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.55■□□□□ 0.4
KLHL41O60662 KRT18P48-201ENST00000434763 852 ntBASIC17.55■□□□□ 0.4
KLHL41O60662 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.55■□□□□ 0.4
KLHL41O60662 VENTXP5-201ENST00000523979 775 ntBASIC17.55■□□□□ 0.4
KLHL41O60662 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.55■□□□□ 0.4
KLHL41O60662 AC116407.4-201ENST00000623319 1061 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms