Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 AC132938.6-201ENST00000623828 1655 ntBASIC18.07■□□□□ 0.48
SYNCRIPO60506 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 PMS2P1-201ENST00000431037 1228 ntBASIC18.07■□□□□ 0.48
SYNCRIPO60506 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 AL356309.3-201ENST00000624132 1934 ntBASIC18.07■□□□□ 0.48
SYNCRIPO60506 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 AC139887.3-201ENST00000568585 713 ntBASIC18.06■□□□□ 0.48
SYNCRIPO60506 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 FAM215A-202ENST00000632077 792 ntBASIC18.06■□□□□ 0.48
SYNCRIPO60506 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SYNCRIPO60506 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNCRIPO60506 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 AC022898.2-201ENST00000616822 1312 ntBASIC18.05■□□□□ 0.48
SYNCRIPO60506 AC097374.2-201ENST00000618617 1306 ntBASIC18.05■□□□□ 0.48
SYNCRIPO60506 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 AP000997.3-201ENST00000623333 2250 ntBASIC18.05■□□□□ 0.48
SYNCRIPO60506 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 AC023511.2-201ENST00000618803 211 ntBASIC18.05■□□□□ 0.48
SYNCRIPO60506 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 NOC2LP2-201ENST00000407594 1944 ntBASIC18.05■□□□□ 0.48
SYNCRIPO60506 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNCRIPO60506 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNCRIPO60506 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms