Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.39■□□□□ 0.05
XRCC2O43543 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.39■□□□□ 0.05
XRCC2O43543 GUSBP12-201ENST00000513727 720 ntBASIC15.39■□□□□ 0.05
XRCC2O43543 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.39■□□□□ 0.05
XRCC2O43543 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
XRCC2O43543 RNF126P1-202ENST00000569893 925 ntBASIC15.39■□□□□ 0.05
XRCC2O43543 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
XRCC2O43543 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.39■□□□□ 0.05
XRCC2O43543 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.39■□□□□ 0.05
XRCC2O43543 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.39■□□□□ 0.05
XRCC2O43543 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.39■□□□□ 0.05
XRCC2O43543 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
XRCC2O43543 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.39■□□□□ 0.05
XRCC2O43543 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.38■□□□□ 0.05
XRCC2O43543 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 LINC00304-203ENST00000565008 1864 ntBASIC15.38■□□□□ 0.05
XRCC2O43543 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
XRCC2O43543 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.38■□□□□ 0.05
XRCC2O43543 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 SPDYE13P-201ENST00000445314 798 ntBASIC15.38■□□□□ 0.05
XRCC2O43543 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.38■□□□□ 0.05
XRCC2O43543 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.38■□□□□ 0.05
XRCC2O43543 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.38■□□□□ 0.05
XRCC2O43543 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
XRCC2O43543 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
XRCC2O43543 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.38■□□□□ 0.05
XRCC2O43543 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
XRCC2O43543 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC2O43543 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
XRCC2O43543 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
XRCC2O43543 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
XRCC2O43543 AL138688.1-201ENST00000624851 1594 ntBASIC15.37■□□□□ 0.05
XRCC2O43543 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
XRCC2O43543 PRORSD1P-202ENST00000563365 2154 ntBASIC15.37■□□□□ 0.05
XRCC2O43543 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
XRCC2O43543 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
XRCC2O43543 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
XRCC2O43543 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.37■□□□□ 0.05
XRCC2O43543 AL136038.3-201ENST00000561909 1096 ntBASIC15.37■□□□□ 0.05
XRCC2O43543 AC009053.2-201ENST00000563701 2365 ntBASIC15.37■□□□□ 0.05
XRCC2O43543 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
XRCC2O43543 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.37■□□□□ 0.05
XRCC2O43543 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.37■□□□□ 0.05
XRCC2O43543 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC2O43543 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
XRCC2O43543 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
XRCC2O43543 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC2O43543 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
XRCC2O43543 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC2O43543 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.36■□□□□ 0.05
XRCC2O43543 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 OR6D1P-203ENST00000641209 4860 ntBASIC15.36■□□□□ 0.05
XRCC2O43543 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.36■□□□□ 0.05
XRCC2O43543 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC2O43543 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
XRCC2O43543 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms