Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KCNQ3O43525 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNQ3O43525 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22.57■■□□□ 1.2
KCNQ3O43525 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNQ3O43525 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
KCNQ3O43525 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC22.57■■□□□ 1.2
KCNQ3O43525 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNQ3O43525 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNQ3O43525 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.57■■□□□ 1.2
KCNQ3O43525 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KCNQ3O43525 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.57■■□□□ 1.2
KCNQ3O43525 PTCHD3P3-201ENST00000403073 906 ntBASIC22.57■■□□□ 1.2
KCNQ3O43525 LINC00982-205ENST00000420957 435 ntBASIC22.57■■□□□ 1.2
KCNQ3O43525 IGHV3-52-201ENST00000519770 353 ntBASIC22.57■■□□□ 1.2
KCNQ3O43525 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNQ3O43525 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC22.57■■□□□ 1.2
KCNQ3O43525 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC22.57■■□□□ 1.2
KCNQ3O43525 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.57■■□□□ 1.2
KCNQ3O43525 AL353135.1-201ENST00000606729 504 ntBASIC22.57■■□□□ 1.2
KCNQ3O43525 AC008667.4-201ENST00000607370 168 ntBASIC22.57■■□□□ 1.2
KCNQ3O43525 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.57■■□□□ 1.2
KCNQ3O43525 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
KCNQ3O43525 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.57■■□□□ 1.2
KCNQ3O43525 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.57■■□□□ 1.2
KCNQ3O43525 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.57■■□□□ 1.2
KCNQ3O43525 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC22.57■■□□□ 1.2
KCNQ3O43525 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNQ3O43525 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC22.57■■□□□ 1.2
KCNQ3O43525 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC22.57■■□□□ 1.2
KCNQ3O43525 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
KCNQ3O43525 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNQ3O43525 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNQ3O43525 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
KCNQ3O43525 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
KCNQ3O43525 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNQ3O43525 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC22.56■■□□□ 1.2
KCNQ3O43525 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC22.56■■□□□ 1.2
KCNQ3O43525 AC002558.1-201ENST00000488906 803 ntBASIC22.56■■□□□ 1.2
KCNQ3O43525 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.56■■□□□ 1.2
KCNQ3O43525 AL691403.2-201ENST00000618460 490 ntBASIC22.56■■□□□ 1.2
KCNQ3O43525 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
KCNQ3O43525 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNQ3O43525 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.56■■□□□ 1.2
KCNQ3O43525 ABALON-201ENST00000629058 1903 ntBASIC22.56■■□□□ 1.2
KCNQ3O43525 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNQ3O43525 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNQ3O43525 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.56■■□□□ 1.2
KCNQ3O43525 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC22.55■■□□□ 1.2
KCNQ3O43525 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.55■■□□□ 1.2
KCNQ3O43525 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.55■■□□□ 1.2
KCNQ3O43525 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
KCNQ3O43525 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.55■■□□□ 1.2
KCNQ3O43525 AC004832.2-201ENST00000426397 482 ntBASIC22.55■■□□□ 1.2
KCNQ3O43525 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.55■■□□□ 1.2
KCNQ3O43525 HCG4B-203ENST00000450128 991 ntBASIC22.55■■□□□ 1.2
KCNQ3O43525 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.55■■□□□ 1.2
KCNQ3O43525 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.55■■□□□ 1.2
KCNQ3O43525 OR7E47P-204ENST00000575924 449 ntBASIC22.55■■□□□ 1.2
KCNQ3O43525 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
KCNQ3O43525 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
KCNQ3O43525 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
KCNQ3O43525 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
KCNQ3O43525 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.55■■□□□ 1.2
KCNQ3O43525 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
KCNQ3O43525 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC22.55■■□□□ 1.2
KCNQ3O43525 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KCNQ3O43525 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
KCNQ3O43525 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KCNQ3O43525 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNQ3O43525 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC22.54■■□□□ 1.2
KCNQ3O43525 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
KCNQ3O43525 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
KCNQ3O43525 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KCNQ3O43525 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNQ3O43525 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNQ3O43525 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KCNQ3O43525 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms