Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MYCLP1-201ENST00000372451 1075 ntBASIC24.33■■□□□ 1.48
CHD2O14647 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC24.33■■□□□ 1.48
CHD2O14647 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC24.33■■□□□ 1.48
CHD2O14647 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC24.33■■□□□ 1.48
CHD2O14647 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CHD2O14647 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHD2O14647 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD2O14647 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC24.32■■□□□ 1.48
CHD2O14647 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CHD2O14647 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC24.32■■□□□ 1.48
CHD2O14647 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC24.32■■□□□ 1.48
CHD2O14647 NAA50-208ENST00000497255 789 ntTSL 5 BASIC24.32■■□□□ 1.48
CHD2O14647 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHD2O14647 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD2O14647 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC24.32■■□□□ 1.48
CHD2O14647 AC025048.6-201ENST00000634326 1161 ntBASIC24.32■■□□□ 1.48
CHD2O14647 RAB34-224ENST00000636513 888 ntTSL 5 BASIC24.32■■□□□ 1.48
CHD2O14647 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD2O14647 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC24.32■■□□□ 1.48
CHD2O14647 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.32■■□□□ 1.48
CHD2O14647 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD2O14647 AC008677.1-201ENST00000519230 1561 ntBASIC24.31■■□□□ 1.48
CHD2O14647 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHD2O14647 ENSA-206ENST00000361631 725 ntTSL 2 BASIC24.31■■□□□ 1.48
CHD2O14647 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHD2O14647 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CHD2O14647 RAC2-204ENST00000406508 893 ntTSL 5 BASIC24.31■■□□□ 1.48
CHD2O14647 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC24.31■■□□□ 1.48
CHD2O14647 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHD2O14647 AC084121.4-201ENST00000641598 221 ntBASIC24.31■■□□□ 1.48
CHD2O14647 AF228730.8-201ENST00000642140 221 ntBASIC24.31■■□□□ 1.48
CHD2O14647 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHD2O14647 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHD2O14647 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHD2O14647 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHD2O14647 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC24.31■■□□□ 1.48
CHD2O14647 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC24.31■■□□□ 1.48
CHD2O14647 AL096828.2-201ENST00000567259 1965 ntBASIC24.31■■□□□ 1.48
CHD2O14647 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC24.31■■□□□ 1.48
CHD2O14647 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
CHD2O14647 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHD2O14647 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC24.31■■□□□ 1.48
CHD2O14647 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC24.31■■□□□ 1.48
CHD2O14647 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHD2O14647 AC069120.2-201ENST00000524091 540 ntBASIC24.31■■□□□ 1.48
CHD2O14647 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC24.31■■□□□ 1.48
CHD2O14647 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC24.31■■□□□ 1.48
CHD2O14647 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHD2O14647 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHD2O14647 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC24.3■■□□□ 1.48
CHD2O14647 EFTUD1P1-204ENST00000560401 1798 ntBASIC24.3■■□□□ 1.48
CHD2O14647 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD2O14647 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
CHD2O14647 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD2O14647 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD2O14647 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC24.3■■□□□ 1.48
CHD2O14647 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC24.3■■□□□ 1.48
CHD2O14647 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC24.3■■□□□ 1.48
CHD2O14647 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD2O14647 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
CHD2O14647 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD2O14647 AC073592.3-201ENST00000625118 1834 ntBASIC24.3■■□□□ 1.48
CHD2O14647 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC24.3■■□□□ 1.48
CHD2O14647 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD2O14647 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD2O14647 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CHD2O14647 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD2O14647 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CHD2O14647 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC24.29■■□□□ 1.48
CHD2O14647 RBPMS2P1-201ENST00000437762 623 ntBASIC24.29■■□□□ 1.48
CHD2O14647 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC24.29■■□□□ 1.48
CHD2O14647 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC24.29■■□□□ 1.48
CHD2O14647 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC24.29■■□□□ 1.48
CHD2O14647 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD2O14647 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD2O14647 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD2O14647 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CHD2O14647 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD2O14647 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD2O14647 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD2O14647 COX5BP8-201ENST00000416911 349 ntBASIC24.28■■□□□ 1.48
CHD2O14647 GOLGA6L11P-201ENST00000417252 1298 ntBASIC24.28■■□□□ 1.48
CHD2O14647 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC24.28■■□□□ 1.48
CHD2O14647 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC24.28■■□□□ 1.48
CHD2O14647 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD2O14647 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC24.28■■□□□ 1.48
CHD2O14647 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.28■■□□□ 1.48
CHD2O14647 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD2O14647 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC24.28■■□□□ 1.48
CHD2O14647 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD2O14647 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD2O14647 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD2O14647 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD2O14647 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD2O14647 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC24.28■■□□□ 1.48
CHD2O14647 AL671277.1-201ENST00000429656 993 ntBASIC24.28■■□□□ 1.48
CHD2O14647 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC24.28■■□□□ 1.48
CHD2O14647 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CHD2O14647 MMP17-203ENST00000535004 719 ntTSL 3 BASIC24.28■■□□□ 1.48
CHD2O14647 SRP9-204ENST00000619790 377 ntTSL 2 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms