Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
AP3D1O14617 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3D1O14617 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3D1O14617 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3D1O14617 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
AP3D1O14617 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP3D1O14617 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
AP3D1O14617 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
AP3D1O14617 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3D1O14617 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3D1O14617 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AP3D1O14617 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3D1O14617 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
AP3D1O14617 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.57■□□□□ 0.24
AP3D1O14617 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
AP3D1O14617 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3D1O14617 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3D1O14617 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3D1O14617 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.57■□□□□ 0.24
AP3D1O14617 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.57■□□□□ 0.24
AP3D1O14617 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP3D1O14617 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.57■□□□□ 0.24
AP3D1O14617 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3D1O14617 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.57■□□□□ 0.24
AP3D1O14617 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.57■□□□□ 0.24
AP3D1O14617 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.57■□□□□ 0.24
AP3D1O14617 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.57■□□□□ 0.24
AP3D1O14617 AC006011.2-201ENST00000621313 1158 ntBASIC16.57■□□□□ 0.24
AP3D1O14617 AL031432.5-201ENST00000641059 760 ntBASIC16.57■□□□□ 0.24
AP3D1O14617 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
AP3D1O14617 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.57■□□□□ 0.24
AP3D1O14617 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.57■□□□□ 0.24
AP3D1O14617 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.57■□□□□ 0.24
AP3D1O14617 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3D1O14617 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3D1O14617 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.57■□□□□ 0.24
AP3D1O14617 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.57■□□□□ 0.24
AP3D1O14617 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
AP3D1O14617 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
AP3D1O14617 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
AP3D1O14617 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3D1O14617 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3D1O14617 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3D1O14617 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
AP3D1O14617 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.56■□□□□ 0.24
AP3D1O14617 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
AP3D1O14617 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.56■□□□□ 0.24
AP3D1O14617 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3D1O14617 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.56■□□□□ 0.24
AP3D1O14617 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.56■□□□□ 0.24
AP3D1O14617 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3D1O14617 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
AP3D1O14617 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.56■□□□□ 0.24
AP3D1O14617 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3D1O14617 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3D1O14617 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
AP3D1O14617 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3D1O14617 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.56■□□□□ 0.24
AP3D1O14617 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3D1O14617 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
AP3D1O14617 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
AP3D1O14617 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3D1O14617 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
AP3D1O14617 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3D1O14617 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3D1O14617 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
AP3D1O14617 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 AL645608.8-201ENST00000606034 2086 ntBASIC16.55■□□□□ 0.24
AP3D1O14617 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.55■□□□□ 0.24
AP3D1O14617 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 AL391807.1-203ENST00000604392 2365 ntBASIC16.55■□□□□ 0.24
AP3D1O14617 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
AP3D1O14617 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms