Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.07■□□□□ 0
SDCBPO00560 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.07■□□□□ 0
SDCBPO00560 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.07■□□□□ 0
SDCBPO00560 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.07■□□□□ 0
SDCBPO00560 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SDCBPO00560 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SDCBPO00560 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SDCBPO00560 UBALD1-205ENST00000590891 2641 ntBASIC15.07■□□□□ 0
SDCBPO00560 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SDCBPO00560 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SDCBPO00560 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SDCBPO00560 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SDCBPO00560 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
SDCBPO00560 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SDCBPO00560 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.06■□□□□ 0
SDCBPO00560 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.06■□□□□ 0
SDCBPO00560 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.06■□□□□ 0
SDCBPO00560 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SDCBPO00560 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.06■□□□□ 0
SDCBPO00560 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.06■□□□□ 0
SDCBPO00560 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 AC087499.1-201ENST00000418141 1075 ntBASIC15.06■□□□□ 0
SDCBPO00560 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
SDCBPO00560 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SDCBPO00560 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.06■□□□□ 0
SDCBPO00560 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.06■□□□□ 0
SDCBPO00560 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.06■□□□□ 0
SDCBPO00560 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.06■□□□□ 0
SDCBPO00560 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.06■□□□□ 0
SDCBPO00560 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SDCBPO00560 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.06■□□□□ 0
SDCBPO00560 AC092865.7-201ENST00000641832 219 ntBASIC15.06■□□□□ 0
SDCBPO00560 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.06■□□□□ 0
SDCBPO00560 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
SDCBPO00560 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SDCBPO00560 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.06■□□□□ 0
SDCBPO00560 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SDCBPO00560 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SDCBPO00560 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.06■□□□□ 0
SDCBPO00560 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.06■□□□□ 0
SDCBPO00560 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SDCBPO00560 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.05■□□□□ 0
SDCBPO00560 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SDCBPO00560 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SDCBPO00560 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.05■□□□□ 0
SDCBPO00560 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SDCBPO00560 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SDCBPO00560 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.05■□□□□ 0
SDCBPO00560 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SDCBPO00560 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 ECEL1P3-201ENST00000427961 737 ntBASIC15.05■□□□□ -0
SDCBPO00560 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.05■□□□□ -0
SDCBPO00560 SEC1P-202ENST00000473944 940 ntBASIC15.05■□□□□ -0
SDCBPO00560 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.05■□□□□ -0
SDCBPO00560 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.05■□□□□ -0
SDCBPO00560 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
SDCBPO00560 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SDCBPO00560 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SDCBPO00560 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.05■□□□□ -0
SDCBPO00560 AL121761.2-201ENST00000598007 1648 ntBASIC15.05■□□□□ -0
SDCBPO00560 AC132938.6-201ENST00000623828 1655 ntBASIC15.05■□□□□ -0
SDCBPO00560 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
SDCBPO00560 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SDCBPO00560 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SDCBPO00560 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.05■□□□□ -0
SDCBPO00560 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.05■□□□□ -0
SDCBPO00560 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SDCBPO00560 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
SDCBPO00560 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SDCBPO00560 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms