Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.3■□□□□ 0.36
EIF3FO00303 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
EIF3FO00303 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.29■□□□□ 0.36
EIF3FO00303 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
EIF3FO00303 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.29■□□□□ 0.36
EIF3FO00303 AC233702.3-201ENST00000578656 1387 ntBASIC17.29■□□□□ 0.36
EIF3FO00303 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.29■□□□□ 0.36
EIF3FO00303 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
EIF3FO00303 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 AP002383.4-201ENST00000442518 975 ntBASIC17.29■□□□□ 0.36
EIF3FO00303 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.29■□□□□ 0.36
EIF3FO00303 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.29■□□□□ 0.36
EIF3FO00303 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.29■□□□□ 0.36
EIF3FO00303 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.29■□□□□ 0.36
EIF3FO00303 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.29■□□□□ 0.36
EIF3FO00303 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
EIF3FO00303 AC069148.1-201ENST00000608741 768 ntBASIC17.29■□□□□ 0.36
EIF3FO00303 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.29■□□□□ 0.36
EIF3FO00303 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
EIF3FO00303 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.29■□□□□ 0.36
EIF3FO00303 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EIF3FO00303 AC016396.2-201ENST00000562575 1417 ntBASIC17.29■□□□□ 0.36
EIF3FO00303 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.29■□□□□ 0.36
EIF3FO00303 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
EIF3FO00303 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
EIF3FO00303 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
EIF3FO00303 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
EIF3FO00303 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.28■□□□□ 0.36
EIF3FO00303 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
EIF3FO00303 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
EIF3FO00303 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
EIF3FO00303 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.28■□□□□ 0.36
EIF3FO00303 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.28■□□□□ 0.36
EIF3FO00303 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.28■□□□□ 0.36
EIF3FO00303 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.28■□□□□ 0.36
EIF3FO00303 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.28■□□□□ 0.36
EIF3FO00303 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
EIF3FO00303 AC011467.2-201ENST00000598425 242 ntBASIC17.28■□□□□ 0.36
EIF3FO00303 AL445228.2-201ENST00000605589 952 ntBASIC17.28■□□□□ 0.36
EIF3FO00303 AL139327.4-201ENST00000612362 153 ntBASIC17.28■□□□□ 0.36
EIF3FO00303 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.28■□□□□ 0.36
EIF3FO00303 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.28■□□□□ 0.36
EIF3FO00303 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.28■□□□□ 0.36
EIF3FO00303 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
EIF3FO00303 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EIF3FO00303 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.27■□□□□ 0.36
EIF3FO00303 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
EIF3FO00303 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.27■□□□□ 0.36
EIF3FO00303 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
EIF3FO00303 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.27■□□□□ 0.36
EIF3FO00303 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
EIF3FO00303 ATP5G2P1-201ENST00000433580 426 ntBASIC17.27■□□□□ 0.36
EIF3FO00303 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.27■□□□□ 0.36
EIF3FO00303 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.27■□□□□ 0.36
EIF3FO00303 IGHV3-52-201ENST00000519770 353 ntBASIC17.27■□□□□ 0.36
EIF3FO00303 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.27■□□□□ 0.36
EIF3FO00303 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
EIF3FO00303 AP002414.4-201ENST00000589764 1148 ntBASIC17.27■□□□□ 0.36
EIF3FO00303 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
EIF3FO00303 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EIF3FO00303 AC019129.2-201ENST00000609837 1235 ntBASIC17.27■□□□□ 0.36
EIF3FO00303 AC010331.1-201ENST00000611423 582 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms