Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PDLIM1O00151 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDLIM1O00151 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDLIM1O00151 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PDLIM1O00151 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDLIM1O00151 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.88■□□□□ 0.29
PDLIM1O00151 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.88■□□□□ 0.29
PDLIM1O00151 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.88■□□□□ 0.29
PDLIM1O00151 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.88■□□□□ 0.29
PDLIM1O00151 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.88■□□□□ 0.29
PDLIM1O00151 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 AL138688.1-201ENST00000624851 1594 ntBASIC16.88■□□□□ 0.29
PDLIM1O00151 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.88■□□□□ 0.29
PDLIM1O00151 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.88■□□□□ 0.29
PDLIM1O00151 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM1O00151 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDLIM1O00151 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 KRT8P50-201ENST00000562022 1438 ntBASIC16.87■□□□□ 0.29
PDLIM1O00151 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PDLIM1O00151 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 MMP23A-201ENST00000234610 1017 ntBASIC16.87■□□□□ 0.29
PDLIM1O00151 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.87■□□□□ 0.29
PDLIM1O00151 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.87■□□□□ 0.29
PDLIM1O00151 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.87■□□□□ 0.29
PDLIM1O00151 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.87■□□□□ 0.29
PDLIM1O00151 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.87■□□□□ 0.29
PDLIM1O00151 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.87■□□□□ 0.29
PDLIM1O00151 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.87■□□□□ 0.29
PDLIM1O00151 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
PDLIM1O00151 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 AC093010.1-201ENST00000473625 1624 ntBASIC16.87■□□□□ 0.29
PDLIM1O00151 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
PDLIM1O00151 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.87■□□□□ 0.29
PDLIM1O00151 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 SDHAP2-201ENST00000455183 2001 ntBASIC16.87■□□□□ 0.29
PDLIM1O00151 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PDLIM1O00151 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM1O00151 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PDLIM1O00151 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM1O00151 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PDLIM1O00151 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM1O00151 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM1O00151 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PDLIM1O00151 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PDLIM1O00151 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM1O00151 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 AC087499.1-201ENST00000418141 1075 ntBASIC16.86■□□□□ 0.29
PDLIM1O00151 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM1O00151 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PDLIM1O00151 AC097488.1-201ENST00000507834 756 ntBASIC16.86■□□□□ 0.29
PDLIM1O00151 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM1O00151 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PDLIM1O00151 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM1O00151 PCDHA14-201ENST00000506751 2298 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms