Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 FLJ13224-201ENST00000313737 1514 ntBASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA2E9PIF3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 INTS4P1-201ENST00000438455 1935 ntBASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 OR6D1P-203ENST00000641209 4860 ntBASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 KRT18P67-201ENST00000432816 1264 ntBASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 AL355877.3-201ENST00000622820 899 ntBASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 AC022898.2-201ENST00000616822 1312 ntBASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA2E9PIF3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 AL031284.1-201ENST00000419297 478 ntBASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 AC011467.2-201ENST00000598425 242 ntBASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 AP001269.4-201ENST00000609611 512 ntBASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 AC148477.8-201ENST00000624298 468 ntBASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA2E9PIF3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms