Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LOC285556D6RIA3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 AL135999.2-201ENST00000622438 1686 ntBASIC20.02■□□□□ 0.8
LOC285556D6RIA3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 AC098818.2-201ENST00000564925 2320 ntBASIC20.02■□□□□ 0.8
LOC285556D6RIA3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 HLA-J-203ENST00000494367 1087 ntBASIC20.02■□□□□ 0.8
LOC285556D6RIA3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 AL096865.1-201ENST00000606796 927 ntBASIC20.02■□□□□ 0.8
LOC285556D6RIA3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LOC285556D6RIA3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LOC285556D6RIA3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LOC285556D6RIA3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.02■□□□□ 0.79
LOC285556D6RIA3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.02■□□□□ 0.79
LOC285556D6RIA3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LOC285556D6RIA3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 AC140658.5-201ENST00000438532 169 ntBASIC20.01■□□□□ 0.79
LOC285556D6RIA3 AC112191.1-201ENST00000523689 701 ntBASIC20.01■□□□□ 0.79
LOC285556D6RIA3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LOC285556D6RIA3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20■□□□□ 0.79
LOC285556D6RIA3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20■□□□□ 0.79
LOC285556D6RIA3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20■□□□□ 0.79
LOC285556D6RIA3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
LOC285556D6RIA3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 KRT18P55-202ENST00000578578 1546 ntBASIC20■□□□□ 0.79
LOC285556D6RIA3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 AC046185.3-201ENST00000623228 1824 ntBASIC20■□□□□ 0.79
LOC285556D6RIA3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20■□□□□ 0.79
LOC285556D6RIA3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 REXO1L9P-201ENST00000604264 2108 ntBASIC20■□□□□ 0.79
LOC285556D6RIA3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 PI4KAP1-204ENST00000612579 1703 ntBASIC20■□□□□ 0.79
LOC285556D6RIA3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20■□□□□ 0.79
LOC285556D6RIA3 FLJ13224-201ENST00000313737 1514 ntBASIC20■□□□□ 0.79
LOC285556D6RIA3 AL355306.1-201ENST00000415580 579 ntBASIC20■□□□□ 0.79
LOC285556D6RIA3 BCRP1-201ENST00000444246 691 ntBASIC20■□□□□ 0.79
LOC285556D6RIA3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20■□□□□ 0.79
LOC285556D6RIA3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20■□□□□ 0.79
LOC285556D6RIA3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20■□□□□ 0.79
LOC285556D6RIA3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20■□□□□ 0.79
LOC285556D6RIA3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LOC285556D6RIA3 AC093520.2-201ENST00000561830 333 ntBASIC20■□□□□ 0.79
LOC285556D6RIA3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20■□□□□ 0.79
LOC285556D6RIA3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20■□□□□ 0.79
LOC285556D6RIA3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LOC285556D6RIA3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms