Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 NUS1P1-201ENST00000446295 882 ntBASIC18.34■□□□□ 0.53
SRRM3A6NNA2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 GMCL1P1-201ENST00000463439 1581 ntBASIC18.34■□□□□ 0.53
SRRM3A6NNA2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRRM3A6NNA2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRRM3A6NNA2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRRM3A6NNA2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRRM3A6NNA2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.33■□□□□ 0.53
SRRM3A6NNA2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.33■□□□□ 0.53
SRRM3A6NNA2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRRM3A6NNA2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRRM3A6NNA2 STARP1-201ENST00000397973 869 ntBASIC18.33■□□□□ 0.52
SRRM3A6NNA2 TUBB8P6-201ENST00000436895 1288 ntBASIC18.33■□□□□ 0.52
SRRM3A6NNA2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SRRM3A6NNA2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.33■□□□□ 0.52
SRRM3A6NNA2 AC106795.1-205ENST00000512851 1056 ntBASIC18.33■□□□□ 0.52
SRRM3A6NNA2 SLC25A6P4-201ENST00000586535 553 ntBASIC18.33■□□□□ 0.52
SRRM3A6NNA2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SRRM3A6NNA2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRRM3A6NNA2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SRRM3A6NNA2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRRM3A6NNA2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRRM3A6NNA2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRRM3A6NNA2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRRM3A6NNA2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 MIR3180-1-201ENST00000580374 94 ntBASIC18.32■□□□□ 0.52
SRRM3A6NNA2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 MIR3180-3-201ENST00000584616 94 ntBASIC18.32■□□□□ 0.52
SRRM3A6NNA2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 AC120114.3-201ENST00000611923 658 ntBASIC18.32■□□□□ 0.52
SRRM3A6NNA2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 CICP6-201ENST00000457191 2729 ntBASIC18.32■□□□□ 0.52
SRRM3A6NNA2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRRM3A6NNA2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 AC133963.1-201ENST00000504166 1679 ntBASIC18.31■□□□□ 0.52
SRRM3A6NNA2 CROCCP2-202ENST00000412962 2773 ntBASIC18.31■□□□□ 0.52
SRRM3A6NNA2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms