Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC026396.1-201ENST00000419388 421 ntBASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 NUS1P1-201ENST00000446295 882 ntBASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 VENTXP7-201ENST00000475503 772 ntBASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC104819.1-201ENST00000504587 486 ntBASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TPSP2-201ENST00000561760 610 ntBASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC124864.1-201ENST00000623408 392 ntBASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC008687.5-201ENST00000593746 558 ntBASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AL121772.3-201ENST00000610840 674 ntBASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC099343.3-201ENST00000605834 2503 ntBASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AL353692.3-201ENST00000407031 1396 ntBASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC004870.1-201ENST00000315132 882 ntBASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC074051.2-201ENST00000565115 352 ntBASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC012615.1-201ENST00000565797 1299 ntBASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 Z69720.1-201ENST00000601483 472 ntBASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TCRBV4S1A1TA0A5B7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms