Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 LINC00167-201ENST00000530583 1419 ntBASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.18□□□□□ -0.3
IGKV3D-20A0A0C4DH25 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 REXO1L11P-201ENST00000620964 1927 ntBASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 KRT18P29-201ENST00000397031 1267 ntBASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC007663.1-201ENST00000438948 1240 ntBASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 CCR12P-201ENST00000446203 998 ntBASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 FAM201B-201ENST00000458407 597 ntBASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 LINC01451-201ENST00000623792 534 ntBASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC009949.1-201ENST00000623048 1830 ntBASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC142381.4-202ENST00000563973 229 ntBASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms