Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 KRT17P6-201ENST00000453795 1220 ntBASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 FOSL1P1-201ENST00000511041 816 ntBASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AC074051.2-201ENST00000565115 352 ntBASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AP005901.3-202ENST00000581653 237 ntBASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AC067852.2-201ENST00000590513 2313 ntBASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AC026396.1-201ENST00000419388 421 ntBASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 IGHV3-47-201ENST00000425060 335 ntBASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AL732292.2-201ENST00000609649 430 ntBASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 COX5BP2-201ENST00000392354 334 ntBASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AC009533.2-201ENST00000543664 586 ntBASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AL121772.3-201ENST00000610840 674 ntBASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 AC010460.3-201ENST00000511359 1579 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms