Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 HBZP1-201ENST00000354915 429 ntBASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 AC063952.2-201ENST00000498792 1227 ntBASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 AC022616.7-201ENST00000525383 220 ntBASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV1A0A0A0MS02 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 IGHGP-201ENST00000390555 1178 ntBASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 AL671277.2-201ENST00000458060 996 ntBASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 DUX4L26-201ENST00000489078 1255 ntBASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 VENTXP5-201ENST00000523979 775 ntBASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 GPR32P1-201ENST00000601788 811 ntBASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms