Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 RBM17P3-201ENST00000417687 1192 ntBASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 AC093909.1-201ENST00000504731 1122 ntBASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 AC009533.2-201ENST00000543664 586 ntBASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 AC009154.2-201ENST00000621177 724 ntBASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 AL355877.3-201ENST00000622820 899 ntBASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 AF228730.7-201ENST00000641842 219 ntBASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 TP73-AS1-210ENST00000637775 1455 ntBASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 RCN1P2-201ENST00000398357 915 ntBASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 AC005336.2-201ENST00000593183 939 ntBASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA3Q9Y5H0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
PCDHGA3Q9Y5H0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGA3Q9Y5H0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 MIR574-201ENST00000385209 96 ntBASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 AC018712.1-201ENST00000455767 687 ntBASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA3Q9Y5H0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms