Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 MIR5100-201ENST00000579544 119 ntBASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PCDHGA6Q9Y5G7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 AC112777.1-201ENST00000540175 1423 ntBASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 AC079776.4-201ENST00000511039 504 ntBASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 AC009053.2-201ENST00000563701 2365 ntBASIC17.06■□□□□ 0.32
PCDHGA6Q9Y5G7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 TSPY12P-201ENST00000421279 868 ntBASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA6Q9Y5G7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA6Q9Y5G7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms