Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB9Q9Y5E1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 MIR940-201ENST00000401276 94 ntBASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 KRT18P67-201ENST00000432816 1264 ntBASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 AL591684.3-201ENST00000605187 298 ntBASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 TP73-AS1-207ENST00000624167 988 ntBASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 AC125634.1-201ENST00000438758 1403 ntBASIC17.98■□□□□ 0.47
PCDHB9Q9Y5E1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 POLD2P1-201ENST00000511220 997 ntBASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 SLC25A1P1-201ENST00000528351 927 ntBASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 AL138831.2-201ENST00000606564 490 ntBASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 AC116407.2-201ENST00000613639 860 ntBASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 AC009949.1-201ENST00000623048 1830 ntBASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB9Q9Y5E1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 AC092183.1-201ENST00000469884 875 ntBASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB9Q9Y5E1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHB9Q9Y5E1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms