Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 AL845331.1-201ENST00000424978 1190 ntBASIC17.79■□□□□ 0.44
PKP3Q9Y446 ATP5G2P1-201ENST00000433580 426 ntBASIC17.79■□□□□ 0.44
PKP3Q9Y446 LINC00265-3P-201ENST00000447588 903 ntBASIC17.79■□□□□ 0.44
PKP3Q9Y446 TOB2P1-201ENST00000469761 992 ntBASIC17.79■□□□□ 0.44
PKP3Q9Y446 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 TPSP2-201ENST00000561760 610 ntBASIC17.79■□□□□ 0.44
PKP3Q9Y446 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 BX276092.7-203ENST00000637198 1536 ntBASIC17.78■□□□□ 0.44
PKP3Q9Y446 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 AC097374.2-201ENST00000618617 1306 ntBASIC17.78■□□□□ 0.44
PKP3Q9Y446 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 AC096633.1-201ENST00000422446 749 ntBASIC17.78■□□□□ 0.44
PKP3Q9Y446 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 AC092329.2-201ENST00000598402 547 ntBASIC17.78■□□□□ 0.44
PKP3Q9Y446 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 NPAP1P7-201ENST00000613027 823 ntBASIC17.78■□□□□ 0.44
PKP3Q9Y446 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PKP3Q9Y446 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.78■□□□□ 0.44
PKP3Q9Y446 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PKP3Q9Y446 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.77■□□□□ 0.44
PKP3Q9Y446 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.77■□□□□ 0.44
PKP3Q9Y446 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.77■□□□□ 0.44
PKP3Q9Y446 AC067852.2-201ENST00000590513 2313 ntBASIC17.77■□□□□ 0.44
PKP3Q9Y446 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PKP3Q9Y446 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PKP3Q9Y446 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PKP3Q9Y446 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PKP3Q9Y446 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PKP3Q9Y446 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PKP3Q9Y446 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PKP3Q9Y446 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.77■□□□□ 0.44
PKP3Q9Y446 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.77■□□□□ 0.44
PKP3Q9Y446 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.77■□□□□ 0.44
PKP3Q9Y446 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PKP3Q9Y446 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PKP3Q9Y446 AC092119.3-201ENST00000612618 583 ntBASIC17.77■□□□□ 0.44
PKP3Q9Y446 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.77■□□□□ 0.44
PKP3Q9Y446 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PKP3Q9Y446 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PKP3Q9Y446 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PKP3Q9Y446 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PKP3Q9Y446 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PKP3Q9Y446 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
PKP3Q9Y446 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PKP3Q9Y446 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.77■□□□□ 0.43
PKP3Q9Y446 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PKP3Q9Y446 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PKP3Q9Y446 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 AC125634.1-201ENST00000438758 1403 ntBASIC17.76■□□□□ 0.43
PKP3Q9Y446 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP3Q9Y446 MINOS1P3-201ENST00000457048 203 ntBASIC17.76■□□□□ 0.43
PKP3Q9Y446 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.76■□□□□ 0.43
PKP3Q9Y446 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms