Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AC006116.8-202ENST00000587620 1550 ntBASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AC009102.3-201ENST00000623118 1491 ntBASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 MIR149-201ENST00000384879 89 ntBASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AC211429.1-201ENST00000415277 523 ntBASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AL137013.1-201ENST00000432946 1228 ntBASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AC024243.1-201ENST00000609234 778 ntBASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AC141257.4-201ENST00000634557 245 ntBASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AC136944.6-201ENST00000634818 245 ntBASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AL031432.5-201ENST00000641059 760 ntBASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 AC092865.7-201ENST00000641832 219 ntBASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HHLA3Q9XRX5 GMCL1P1-201ENST00000463439 1581 ntBASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 LINC01023-201ENST00000606054 436 ntBASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 AC097493.4-201ENST00000641197 219 ntBASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.98□□□□□ -0.33
HHLA3Q9XRX5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms