Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 AC092865.7-201ENST00000641832 219 ntBASIC15.82■□□□□ 0.12
COPS3Q9UNS2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 AC011676.5-201ENST00000624864 2660 ntBASIC15.82■□□□□ 0.12
COPS3Q9UNS2 AL162727.3-201ENST00000635661 2787 ntBASIC15.82■□□□□ 0.12
COPS3Q9UNS2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COPS3Q9UNS2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 CICP6-201ENST00000457191 2729 ntBASIC15.81■□□□□ 0.12
COPS3Q9UNS2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPS3Q9UNS2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 ECEL1P2-202ENST00000465689 757 ntBASIC15.8■□□□□ 0.12
COPS3Q9UNS2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 NEK4P2-201ENST00000580004 1012 ntBASIC15.8■□□□□ 0.12
COPS3Q9UNS2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 AC008687.5-201ENST00000593746 558 ntBASIC15.8■□□□□ 0.12
COPS3Q9UNS2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.8■□□□□ 0.12
COPS3Q9UNS2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPS3Q9UNS2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms