Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD9Q9P000 GMCL1P1-201ENST00000463439 1581 ntBASIC15.14■□□□□ 0.01
COMMD9Q9P000 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
COMMD9Q9P000 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.14■□□□□ 0.01
COMMD9Q9P000 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD9Q9P000 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD9Q9P000 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD9Q9P000 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
COMMD9Q9P000 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
COMMD9Q9P000 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
COMMD9Q9P000 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD9Q9P000 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD9Q9P000 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.14■□□□□ 0.01
COMMD9Q9P000 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.13■□□□□ 0.01
COMMD9Q9P000 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.13■□□□□ 0.01
COMMD9Q9P000 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD9Q9P000 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 DOC2GP-204ENST00000639052 2548 ntBASIC15.12■□□□□ 0.01
COMMD9Q9P000 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 AL138688.1-201ENST00000624851 1594 ntBASIC15.12■□□□□ 0.01
COMMD9Q9P000 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 AC091390.4-202ENST00000476426 537 ntBASIC15.12■□□□□ 0.01
COMMD9Q9P000 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COMMD9Q9P000 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.12■□□□□ 0.01
COMMD9Q9P000 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms