Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 AC009533.2-201ENST00000543664 586 ntBASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 AC005336.2-201ENST00000593183 939 ntBASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 HLA-J-201ENST00000462773 1622 ntBASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 AC010460.3-201ENST00000511359 1579 ntBASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBQLN4Q9NRR5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 ATP5G2P1-201ENST00000433580 426 ntBASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 AC007967.3-201ENST00000434308 558 ntBASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 TOB2P1-201ENST00000469761 992 ntBASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.28■□□□□ 0.2
UBQLN4Q9NRR5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 AC005104.2-201ENST00000427818 678 ntBASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 LINC00265-3P-201ENST00000447588 903 ntBASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 NPAP1P7-201ENST00000613027 823 ntBASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
UBQLN4Q9NRR5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBQLN4Q9NRR5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBQLN4Q9NRR5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.27■□□□□ 0.19
UBQLN4Q9NRR5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.27■□□□□ 0.19
UBQLN4Q9NRR5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBQLN4Q9NRR5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.27■□□□□ 0.19
UBQLN4Q9NRR5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.27■□□□□ 0.19
UBQLN4Q9NRR5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBQLN4Q9NRR5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms