Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 HBZP1-201ENST00000354915 429 ntBASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 KRT18P38-201ENST00000449496 1282 ntBASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 AC009154.2-201ENST00000621177 724 ntBASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 AC139713.2-201ENST00000641328 2723 ntBASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 LINC01311-201ENST00000565162 1445 ntBASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC68Q9H2F9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 MIR662-201ENST00000384847 95 ntBASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 IGHGP-201ENST00000390555 1178 ntBASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC68Q9H2F9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC68Q9H2F9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.43
CCDC68Q9H2F9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC68Q9H2F9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC68Q9H2F9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC68Q9H2F9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC68Q9H2F9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC68Q9H2F9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 GPR32P1-201ENST00000601788 811 ntBASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 AC012313.1-201ENST00000593393 3059 ntBASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC68Q9H2F9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC68Q9H2F9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms