Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NBPF3Q9H094 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NBPF3Q9H094 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NBPF3Q9H094 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NBPF3Q9H094 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NBPF3Q9H094 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NBPF3Q9H094 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NBPF3Q9H094 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 AP001269.4-201ENST00000609611 512 ntBASIC20.96■□□□□ 0.95
NBPF3Q9H094 AC116407.2-201ENST00000613639 860 ntBASIC20.96■□□□□ 0.95
NBPF3Q9H094 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NBPF3Q9H094 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NBPF3Q9H094 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NBPF3Q9H094 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
NBPF3Q9H094 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NBPF3Q9H094 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NBPF3Q9H094 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NBPF3Q9H094 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NBPF3Q9H094 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NBPF3Q9H094 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NBPF3Q9H094 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 AF238378.1-201ENST00000526806 358 ntBASIC20.95■□□□□ 0.94
NBPF3Q9H094 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NBPF3Q9H094 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.95■□□□□ 0.94
NBPF3Q9H094 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
NBPF3Q9H094 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NBPF3Q9H094 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NBPF3Q9H094 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 AC005104.2-201ENST00000427818 678 ntBASIC20.94■□□□□ 0.94
NBPF3Q9H094 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.94■□□□□ 0.94
NBPF3Q9H094 AC132008.2-207ENST00000454517 770 ntBASIC20.94■□□□□ 0.94
NBPF3Q9H094 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.94■□□□□ 0.94
NBPF3Q9H094 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.94■□□□□ 0.94
NBPF3Q9H094 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.94■□□□□ 0.94
NBPF3Q9H094 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NBPF3Q9H094 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NBPF3Q9H094 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.94■□□□□ 0.94
NBPF3Q9H094 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NBPF3Q9H094 BX276092.7-203ENST00000637198 1536 ntBASIC20.94■□□□□ 0.94
NBPF3Q9H094 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NBPF3Q9H094 LETM1P2-201ENST00000597330 2178 ntBASIC20.93■□□□□ 0.94
NBPF3Q9H094 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NBPF3Q9H094 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NBPF3Q9H094 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NBPF3Q9H094 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NBPF3Q9H094 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NBPF3Q9H094 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.93■□□□□ 0.94
NBPF3Q9H094 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.93■□□□□ 0.94
NBPF3Q9H094 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NBPF3Q9H094 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.93■□□□□ 0.94
NBPF3Q9H094 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.93■□□□□ 0.94
NBPF3Q9H094 AL591684.3-201ENST00000605187 298 ntBASIC20.93■□□□□ 0.94
NBPF3Q9H094 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.93■□□□□ 0.94
NBPF3Q9H094 AD001527.2-201ENST00000622994 785 ntBASIC20.93■□□□□ 0.94
NBPF3Q9H094 TP73-AS1-207ENST00000624167 988 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms