Protein–RNA interactions for Protein: Q9C099

LRRCC1, Leucine-rich repeat and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1Q9C099 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 FAM220CP-201ENST00000395253 831 ntBASIC21.81■■□□□ 1.08
LRRCC1Q9C099 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 AC122714.2-201ENST00000502787 707 ntBASIC21.81■■□□□ 1.08
LRRCC1Q9C099 AC104819.1-201ENST00000504587 486 ntBASIC21.81■■□□□ 1.08
LRRCC1Q9C099 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 BNIP3P18-201ENST00000593976 575 ntBASIC21.81■■□□□ 1.08
LRRCC1Q9C099 AC011467.2-201ENST00000598425 242 ntBASIC21.81■■□□□ 1.08
LRRCC1Q9C099 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 TP73-AS1-210ENST00000637775 1455 ntBASIC21.81■■□□□ 1.08
LRRCC1Q9C099 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRCC1Q9C099 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 PP12613-201ENST00000424958 2230 ntBASIC21.8■■□□□ 1.08
LRRCC1Q9C099 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
LRRCC1Q9C099 SIRPAP1-201ENST00000448467 1770 ntBASIC21.79■■□□□ 1.08
LRRCC1Q9C099 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 AC019129.2-201ENST00000609837 1235 ntBASIC21.79■■□□□ 1.08
LRRCC1Q9C099 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LRRCC1Q9C099 AL138688.1-201ENST00000624851 1594 ntBASIC21.78■■□□□ 1.08
LRRCC1Q9C099 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 HTR7P1-202ENST00000624664 4411 ntBASIC21.78■■□□□ 1.08
LRRCC1Q9C099 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 AC002558.1-201ENST00000488906 803 ntBASIC21.78■■□□□ 1.08
LRRCC1Q9C099 AC096582.2-201ENST00000510860 516 ntBASIC21.78■■□□□ 1.08
LRRCC1Q9C099 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRCC1Q9C099 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
LRRCC1Q9C099 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.77■■□□□ 1.08
LRRCC1Q9C099 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRCC1Q9C099 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRCC1Q9C099 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRRCC1Q9C099 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms