Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.71■□□□□ 0.42
COL25A1Q9BXS0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
COL25A1Q9BXS0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 AL023806.1-201ENST00000603994 1649 ntBASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 LINC00982-205ENST00000420957 435 ntBASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 MIR4706-201ENST00000582134 82 ntBASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 AL645728.2-201ENST00000641974 660 ntBASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
COL25A1Q9BXS0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 HLA-V-204ENST00000476601 1289 ntBASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL25A1Q9BXS0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 AC005229.1-201ENST00000392885 409 ntBASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 HINT2P1-201ENST00000419438 481 ntBASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 ZNF767P-206ENST00000513792 565 ntBASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 CASP16P-204ENST00000635032 809 ntBASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.68■□□□□ 0.42
COL25A1Q9BXS0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 COX5BP2-201ENST00000392354 334 ntBASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 AC093004.1-201ENST00000508850 424 ntBASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 MIR5572-201ENST00000583188 137 ntBASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.67■□□□□ 0.42
COL25A1Q9BXS0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms