Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
COPS4Q9BT78 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS4Q9BT78 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS4Q9BT78 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPS4Q9BT78 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPS4Q9BT78 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPS4Q9BT78 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPS4Q9BT78 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPS4Q9BT78 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPS4Q9BT78 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPS4Q9BT78 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 CA15P1-201ENST00000481698 905 ntBASIC16.27■□□□□ 0.2
COPS4Q9BT78 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPS4Q9BT78 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 AP003071.4-201ENST00000562276 1284 ntBASIC16.27■□□□□ 0.2
COPS4Q9BT78 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 Z99916.2-201ENST00000604037 246 ntBASIC16.27■□□□□ 0.2
COPS4Q9BT78 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
COPS4Q9BT78 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPS4Q9BT78 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPS4Q9BT78 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.27■□□□□ 0.19
COPS4Q9BT78 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.27■□□□□ 0.19
COPS4Q9BT78 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.27■□□□□ 0.19
COPS4Q9BT78 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPS4Q9BT78 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
COPS4Q9BT78 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPS4Q9BT78 LINC00304-203ENST00000565008 1864 ntBASIC16.27■□□□□ 0.19
COPS4Q9BT78 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPS4Q9BT78 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPS4Q9BT78 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COPS4Q9BT78 LINC01126-201ENST00000623515 1646 ntBASIC16.27■□□□□ 0.19
COPS4Q9BT78 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS4Q9BT78 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS4Q9BT78 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COPS4Q9BT78 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COPS4Q9BT78 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS4Q9BT78 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS4Q9BT78 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS4Q9BT78 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.26■□□□□ 0.19
COPS4Q9BT78 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS4Q9BT78 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS4Q9BT78 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS4Q9BT78 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.26■□□□□ 0.19
COPS4Q9BT78 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS4Q9BT78 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS4Q9BT78 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS4Q9BT78 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS4Q9BT78 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS4Q9BT78 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS4Q9BT78 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS4Q9BT78 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 AC008550.1-201ENST00000511500 884 ntBASIC16.25■□□□□ 0.19
COPS4Q9BT78 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 HLA-J-201ENST00000462773 1622 ntBASIC16.25■□□□□ 0.19
COPS4Q9BT78 DOC2GP-204ENST00000639052 2548 ntBASIC16.25■□□□□ 0.19
COPS4Q9BT78 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 AC100803.2-201ENST00000562459 1963 ntBASIC16.25■□□□□ 0.19
COPS4Q9BT78 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS4Q9BT78 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.25■□□□□ 0.19
COPS4Q9BT78 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms