Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
ABCA3Q99758 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC23.32■■□□□ 1.32
ABCA3Q99758 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ABCA3Q99758 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.32■■□□□ 1.32
ABCA3Q99758 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCA3Q99758 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCA3Q99758 AC063926.2-201ENST00000623766 1308 ntBASIC23.31■■□□□ 1.32
ABCA3Q99758 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
ABCA3Q99758 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCA3Q99758 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC23.31■■□□□ 1.32
ABCA3Q99758 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC23.31■■□□□ 1.32
ABCA3Q99758 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC23.31■■□□□ 1.32
ABCA3Q99758 AC243562.1-201ENST00000560672 389 ntBASIC23.31■■□□□ 1.32
ABCA3Q99758 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC23.31■■□□□ 1.32
ABCA3Q99758 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ABCA3Q99758 BSG-214ENST00000614867 960 ntTSL 3 BASIC23.31■■□□□ 1.32
ABCA3Q99758 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCA3Q99758 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCA3Q99758 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ABCA3Q99758 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC23.31■■□□□ 1.32
ABCA3Q99758 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
ABCA3Q99758 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ABCA3Q99758 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ABCA3Q99758 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC23.3■■□□□ 1.32
ABCA3Q99758 AL592309.1-201ENST00000443127 649 ntBASIC23.3■■□□□ 1.32
ABCA3Q99758 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC23.3■■□□□ 1.32
ABCA3Q99758 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC23.3■■□□□ 1.32
ABCA3Q99758 SPDYE22P-201ENST00000582158 798 ntBASIC23.3■■□□□ 1.32
ABCA3Q99758 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ABCA3Q99758 AL096828.2-201ENST00000567259 1965 ntBASIC23.3■■□□□ 1.32
ABCA3Q99758 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCA3Q99758 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ABCA3Q99758 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCA3Q99758 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCA3Q99758 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCA3Q99758 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCA3Q99758 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.3■■□□□ 1.32
ABCA3Q99758 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.3■■□□□ 1.32
ABCA3Q99758 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.3■■□□□ 1.32
ABCA3Q99758 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ABCA3Q99758 OR8S1-201ENST00000310194 1080 ntBASIC23.3■■□□□ 1.32
ABCA3Q99758 EDF1-203ENST00000371649 790 ntTSL 2 BASIC23.3■■□□□ 1.32
ABCA3Q99758 MIR943-201ENST00000401286 94 ntBASIC23.3■■□□□ 1.32
ABCA3Q99758 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC23.3■■□□□ 1.32
ABCA3Q99758 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC23.3■■□□□ 1.32
ABCA3Q99758 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ABCA3Q99758 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ABCA3Q99758 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCA3Q99758 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ABCA3Q99758 TDG-209ENST00000544861 1387 ntTSL 2 BASIC23.3■■□□□ 1.32
ABCA3Q99758 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ABCA3Q99758 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ABCA3Q99758 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ABCA3Q99758 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ABCA3Q99758 RAC2-204ENST00000406508 893 ntTSL 5 BASIC23.29■■□□□ 1.32
ABCA3Q99758 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC23.29■■□□□ 1.32
ABCA3Q99758 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC23.29■■□□□ 1.32
ABCA3Q99758 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.29■■□□□ 1.32
ABCA3Q99758 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.29■■□□□ 1.32
ABCA3Q99758 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ABCA3Q99758 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ABCA3Q99758 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ABCA3Q99758 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC23.28■■□□□ 1.32
ABCA3Q99758 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ABCA3Q99758 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ABCA3Q99758 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ABCA3Q99758 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
ABCA3Q99758 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ABCA3Q99758 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ABCA3Q99758 COX5BP8-201ENST00000416911 349 ntBASIC23.28■■□□□ 1.32
ABCA3Q99758 BASP1P1-201ENST00000430708 665 ntBASIC23.28■■□□□ 1.32
ABCA3Q99758 PPP6R2P1-201ENST00000450880 1275 ntBASIC23.28■■□□□ 1.32
ABCA3Q99758 COX11-202ENST00000571584 1108 ntTSL 2 BASIC23.28■■□□□ 1.32
ABCA3Q99758 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
ABCA3Q99758 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
ABCA3Q99758 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC23.28■■□□□ 1.32
ABCA3Q99758 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ABCA3Q99758 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.28■■□□□ 1.32
ABCA3Q99758 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.28■■□□□ 1.32
ABCA3Q99758 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ABCA3Q99758 AKAP8P1-201ENST00000434743 1349 ntBASIC23.28■■□□□ 1.32
ABCA3Q99758 AC073592.3-201ENST00000625118 1834 ntBASIC23.28■■□□□ 1.32
ABCA3Q99758 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
ABCA3Q99758 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ABCA3Q99758 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ABCA3Q99758 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC23.28■■□□□ 1.32
ABCA3Q99758 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
ABCA3Q99758 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC23.28■■□□□ 1.32
ABCA3Q99758 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC23.28■■□□□ 1.32
ABCA3Q99758 COQ9-214ENST00000567933 882 ntTSL 3 BASIC23.28■■□□□ 1.32
ABCA3Q99758 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
ABCA3Q99758 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC23.27■■□□□ 1.32
ABCA3Q99758 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
ABCA3Q99758 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC23.27■■□□□ 1.32
ABCA3Q99758 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ABCA3Q99758 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ABCA3Q99758 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ABCA3Q99758 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ABCA3Q99758 MYCLP1-201ENST00000372451 1075 ntBASIC23.27■■□□□ 1.32
ABCA3Q99758 AC005237.2-201ENST00000434368 219 ntBASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms