Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL512638.1-201ENST00000457493 794 ntBASIC29■■■□□ 2.23
IFT140Q96RY7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC29■■■□□ 2.23
IFT140Q96RY7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC29■■■□□ 2.23
IFT140Q96RY7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
IFT140Q96RY7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC29■■■□□ 2.23
IFT140Q96RY7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC29■■■□□ 2.23
IFT140Q96RY7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC29■■■□□ 2.23
IFT140Q96RY7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
IFT140Q96RY7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
IFT140Q96RY7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
IFT140Q96RY7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
IFT140Q96RY7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC28.99■■■□□ 2.23
IFT140Q96RY7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
IFT140Q96RY7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
IFT140Q96RY7 CD81-202ENST00000381036 880 ntTSL 3 BASIC28.99■■■□□ 2.23
IFT140Q96RY7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
IFT140Q96RY7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC28.99■■■□□ 2.23
IFT140Q96RY7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC28.99■■■□□ 2.23
IFT140Q96RY7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC28.99■■■□□ 2.23
IFT140Q96RY7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
IFT140Q96RY7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC28.99■■■□□ 2.23
IFT140Q96RY7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
IFT140Q96RY7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC28.98■■■□□ 2.23
IFT140Q96RY7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
IFT140Q96RY7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC28.98■■■□□ 2.23
IFT140Q96RY7 AC241585.1-201ENST00000433527 519 ntBASIC28.98■■■□□ 2.23
IFT140Q96RY7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC28.98■■■□□ 2.23
IFT140Q96RY7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC28.98■■■□□ 2.23
IFT140Q96RY7 AC010336.2-201ENST00000564226 506 ntBASIC28.98■■■□□ 2.23
IFT140Q96RY7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC28.98■■■□□ 2.23
IFT140Q96RY7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
IFT140Q96RY7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC28.98■■■□□ 2.23
IFT140Q96RY7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
IFT140Q96RY7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 IGHV3-71-201ENST00000523324 359 ntBASIC28.97■■■□□ 2.23
IFT140Q96RY7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
IFT140Q96RY7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
IFT140Q96RY7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
IFT140Q96RY7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
IFT140Q96RY7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
IFT140Q96RY7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
IFT140Q96RY7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
IFT140Q96RY7 GNAS-203ENST00000306120 1878 ntBASIC28.97■■■□□ 2.23
IFT140Q96RY7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC28.97■■■□□ 2.23
IFT140Q96RY7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
IFT140Q96RY7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
IFT140Q96RY7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC28.96■■■□□ 2.23
IFT140Q96RY7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
IFT140Q96RY7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
IFT140Q96RY7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
IFT140Q96RY7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
IFT140Q96RY7 MYCLP1-201ENST00000372451 1075 ntBASIC28.96■■■□□ 2.23
IFT140Q96RY7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
IFT140Q96RY7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC28.96■■■□□ 2.23
IFT140Q96RY7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC28.95■■■□□ 2.23
IFT140Q96RY7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
IFT140Q96RY7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC28.95■■■□□ 2.23
IFT140Q96RY7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
IFT140Q96RY7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
IFT140Q96RY7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC28.95■■■□□ 2.23
IFT140Q96RY7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
IFT140Q96RY7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
IFT140Q96RY7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC28.95■■■□□ 2.22
IFT140Q96RY7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC28.95■■■□□ 2.22
IFT140Q96RY7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC28.95■■■□□ 2.22
IFT140Q96RY7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
IFT140Q96RY7 SPTLC1P1-201ENST00000447199 261 ntBASIC28.95■■■□□ 2.22
IFT140Q96RY7 GPR53P-205ENST00000457298 1084 ntBASIC28.95■■■□□ 2.22
IFT140Q96RY7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC28.95■■■□□ 2.22
IFT140Q96RY7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC28.95■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms