Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 MRPL20P1-201ENST00000400819 433 ntBASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 DUTP2-201ENST00000519164 463 ntBASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 AC011467.4-201ENST00000594891 528 ntBASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 AC027612.4-201ENST00000605371 583 ntBASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 AC096734.2-201ENST00000562054 433 ntBASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 AC010507.1-201ENST00000633895 436 ntBASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 BCAR1-209ENST00000546196 1340 ntBASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRNP40Q96DI7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 AC126763.1-201ENST00000552015 2118 ntBASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SNRNP40Q96DI7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 KRT19P2-202ENST00000557173 1012 ntBASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 AL805961.1-202ENST00000641562 540 ntBASIC15.83■□□□□ 0.12
SNRNP40Q96DI7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms