Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.82■□□□□ 0.28
NMD3Q96D46 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.82■□□□□ 0.28
NMD3Q96D46 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NMD3Q96D46 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.82■□□□□ 0.28
NMD3Q96D46 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.82■□□□□ 0.28
NMD3Q96D46 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.82■□□□□ 0.28
NMD3Q96D46 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NMD3Q96D46 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.82■□□□□ 0.28
NMD3Q96D46 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 AL158047.1-201ENST00000445918 881 ntBASIC16.82■□□□□ 0.28
NMD3Q96D46 B3GAT3P1-201ENST00000471720 806 ntBASIC16.82■□□□□ 0.28
NMD3Q96D46 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.82■□□□□ 0.28
NMD3Q96D46 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NMD3Q96D46 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NMD3Q96D46 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.82■□□□□ 0.28
NMD3Q96D46 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.82■□□□□ 0.28
NMD3Q96D46 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.82■□□□□ 0.28
NMD3Q96D46 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NMD3Q96D46 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.82■□□□□ 0.28
NMD3Q96D46 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NMD3Q96D46 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
NMD3Q96D46 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
NMD3Q96D46 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.82■□□□□ 0.28
NMD3Q96D46 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.81■□□□□ 0.28
NMD3Q96D46 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.81■□□□□ 0.28
NMD3Q96D46 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.81■□□□□ 0.28
NMD3Q96D46 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.81■□□□□ 0.28
NMD3Q96D46 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.81■□□□□ 0.28
NMD3Q96D46 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
NMD3Q96D46 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.81■□□□□ 0.28
NMD3Q96D46 FAM197Y1-201ENST00000421178 764 ntBASIC16.81■□□□□ 0.28
NMD3Q96D46 AC012618.2-201ENST00000428058 849 ntBASIC16.81■□□□□ 0.28
NMD3Q96D46 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.81■□□□□ 0.28
NMD3Q96D46 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.81■□□□□ 0.28
NMD3Q96D46 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
NMD3Q96D46 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.81■□□□□ 0.28
NMD3Q96D46 MIR6786-201ENST00000616843 113 ntBASIC16.81■□□□□ 0.28
NMD3Q96D46 AC011298.2-201ENST00000617989 482 ntBASIC16.81■□□□□ 0.28
NMD3Q96D46 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.81■□□□□ 0.28
NMD3Q96D46 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.81■□□□□ 0.28
NMD3Q96D46 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NMD3Q96D46 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NMD3Q96D46 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NMD3Q96D46 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NMD3Q96D46 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
NMD3Q96D46 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.8■□□□□ 0.28
NMD3Q96D46 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NMD3Q96D46 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NMD3Q96D46 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
NMD3Q96D46 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.8■□□□□ 0.28
NMD3Q96D46 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.8■□□□□ 0.28
NMD3Q96D46 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NMD3Q96D46 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NMD3Q96D46 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.8■□□□□ 0.28
NMD3Q96D46 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NMD3Q96D46 RPS2P55-201ENST00000397318 883 ntBASIC16.8■□□□□ 0.28
NMD3Q96D46 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.8■□□□□ 0.28
NMD3Q96D46 AC107956.1-201ENST00000494359 873 ntBASIC16.8■□□□□ 0.28
NMD3Q96D46 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.8■□□□□ 0.28
NMD3Q96D46 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.8■□□□□ 0.28
NMD3Q96D46 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.8■□□□□ 0.28
NMD3Q96D46 AC233702.5-201ENST00000584107 538 ntBASIC16.8■□□□□ 0.28
NMD3Q96D46 CD177P1-201ENST00000606252 935 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms