Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.65■□□□□ 0.58
RNF25Q96BH1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 AC092597.1-201ENST00000487352 616 ntBASIC18.65■□□□□ 0.58
RNF25Q96BH1 YBX1P2-201ENST00000489612 999 ntBASIC18.65■□□□□ 0.58
RNF25Q96BH1 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF25Q96BH1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF25Q96BH1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF25Q96BH1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF25Q96BH1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF25Q96BH1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
RNF25Q96BH1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF25Q96BH1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF25Q96BH1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF25Q96BH1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 AC005521.1-201ENST00000393351 872 ntBASIC18.64■□□□□ 0.57
RNF25Q96BH1 AC117947.1-201ENST00000427448 529 ntBASIC18.64■□□□□ 0.57
RNF25Q96BH1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 BX664615.1-201ENST00000443558 458 ntBASIC18.64■□□□□ 0.57
RNF25Q96BH1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF25Q96BH1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF25Q96BH1 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF25Q96BH1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF25Q96BH1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF25Q96BH1 AL158211.2-201ENST00000607282 395 ntBASIC18.64■□□□□ 0.57
RNF25Q96BH1 AC004263.2-201ENST00000617183 678 ntBASIC18.64■□□□□ 0.57
RNF25Q96BH1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF25Q96BH1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF25Q96BH1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF25Q96BH1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 AC073508.3-201ENST00000619697 1419 ntBASIC18.64■□□□□ 0.57
RNF25Q96BH1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF25Q96BH1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 STARP1-201ENST00000397973 869 ntBASIC18.63■□□□□ 0.57
RNF25Q96BH1 KRT18P48-201ENST00000434763 852 ntBASIC18.63■□□□□ 0.57
RNF25Q96BH1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 AL136370.1-201ENST00000608166 691 ntBASIC18.63■□□□□ 0.57
RNF25Q96BH1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF25Q96BH1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF25Q96BH1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms