Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 KRT18P65-201ENST00000439811 1286 ntBASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 AC068472.1-201ENST00000474589 881 ntBASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 AL732292.2-201ENST00000609649 430 ntBASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH3KBP1Q96B97 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 PCDHB18P-201ENST00000524813 2368 ntBASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 AL845331.1-201ENST00000424978 1190 ntBASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 UNC93B7-201ENST00000509439 705 ntBASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH3KBP1Q96B97 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SH3KBP1Q96B97 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
SH3KBP1Q96B97 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH3KBP1Q96B97 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH3KBP1Q96B97 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SH3KBP1Q96B97 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms