Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 AL096828.2-201ENST00000567259 1965 ntBASIC17.13■□□□□ 0.33
COL26A1Q96A83 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 SLC25A6P5-201ENST00000435663 894 ntBASIC17.13■□□□□ 0.33
COL26A1Q96A83 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 RN7SL606P-201ENST00000472779 293 ntBASIC17.13■□□□□ 0.33
COL26A1Q96A83 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 Z69720.1-201ENST00000601483 472 ntBASIC17.13■□□□□ 0.33
COL26A1Q96A83 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.13■□□□□ 0.33
COL26A1Q96A83 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL26A1Q96A83 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 UPF3AP3-201ENST00000420996 769 ntBASIC17.12■□□□□ 0.33
COL26A1Q96A83 RFPL4AP1-201ENST00000530883 850 ntBASIC17.12■□□□□ 0.33
COL26A1Q96A83 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 AC074051.2-201ENST00000565115 352 ntBASIC17.12■□□□□ 0.33
COL26A1Q96A83 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.12■□□□□ 0.33
COL26A1Q96A83 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 AC233702.3-201ENST00000578656 1387 ntBASIC17.12■□□□□ 0.33
COL26A1Q96A83 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 LINC00167-201ENST00000530583 1419 ntBASIC17.12■□□□□ 0.33
COL26A1Q96A83 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL26A1Q96A83 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COL26A1Q96A83 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.11■□□□□ 0.33
COL26A1Q96A83 TSPY19P-201ENST00000418461 509 ntBASIC17.11■□□□□ 0.33
COL26A1Q96A83 TSPY18P-201ENST00000441642 509 ntBASIC17.11■□□□□ 0.33
COL26A1Q96A83 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 AC091304.2-201ENST00000564639 760 ntBASIC17.11■□□□□ 0.33
COL26A1Q96A83 AC012615.1-201ENST00000565797 1299 ntBASIC17.11■□□□□ 0.33
COL26A1Q96A83 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.11■□□□□ 0.33
COL26A1Q96A83 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms